peak-motifs Plag1_all_peaks

Motif discovery

Motif 1 oligos_6nt_mkv3_m1

k-mer sig=39.78; evalue=1.7e-40

sssgGggtGGGGCCCCaccCccss

SSGGGGGTGGGGCCCCACCCCSSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

homer_146_KLF3 homer_146_KLF3 D 15 0.6250 0.774 0.484 NA NA

homer_266_Sp1 homer_266_Sp1 R 12 0.5000 0.863 0.431 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

PATZ1 MA1961.2 R 11 0.4583 0.882 0.404 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

TCP3_BAD1_WAB_Mo17_1:EEAD0521:EEADannot TCP3_BAD1_WAB_Mo17_1/EEAD0521/EEADannot D 15 0.6250 0.737 0.461 NA NA

TCP11_Mo17_1:EEAD0513:EEADannot TCP11_Mo17_1/EEAD0513/EEADannot R 15 0.6250 0.728 0.455 NA NA

TCP3_BAD1_WAB_B73_1_m1:EEAD0520:EEADannot TCP3_BAD1_WAB_B73_1_m1/EEAD0520/EEADannot R 15 0.6250 0.711 0.444 NA NA

Total matches= 13 (10 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 181 (10.25%)
Max nb of predicted sites per peak: 85
(Interval_6573)
Mean nb of predicted sites per peak: 11.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv3_m2

k-mer sig=33.71; evalue=1.9e-34

rsaGAGGCCms

SKGGCCTCTSY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rsaGAGGCCms

homer_331_ZNF711 homer_331_ZNF711 R 8 0.7273 0.793 0.576 NA NA

homer_311_ZFX homer_311_ZFX R 8 0.7273 0.753 0.548 NA NA

homer_326_ZNF519 homer_326_ZNF519 D 8 0.6154 0.757 0.466 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rsaGAGGCCms

ZNF770 MA2099.1 R 8 0.7273 0.843 0.613 NA NA

Plagl1 MA1615.2 D 8 0.7273 0.722 0.525 NA NA

TFAP2C MA0814.3 D 8 0.6667 0.748 0.499 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rsaGAGGCCms

NCU05061:UN0091.1:JASPAR NCU05061/UN0091.1/JASPAR D 10 0.9091 0.972 0.884 NA NA

NCU05024:M0476_1.02:CISBP NCU05024/M0476_1.02/CISBP D 10 0.9091 0.917 0.833 NA NA

NCU05022:M0475_1.02:CISBP NCU05022/M0475_1.02/CISBP D 9 0.8182 0.935 0.765 NA NA

Total matches= 53 (50 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 369 (20.89%)
Max nb of predicted sites per peak: 5
(Interval_9266)
Mean nb of predicted sites per peak: 1.19

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv3_m3

k-mer sig=29.03; evalue=9.3e-30

aaAAACAAAgcmw

WKGCTTTGTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAACAAAgcmw

homer_263_Sox4 homer_263_Sox4 R 10 0.7692 0.788 0.606 NA NA

homer_259_Sox10 homer_259_Sox10 R 10 0.7692 0.784 0.603 NA NA

homer_264_Sox6 homer_264_Sox6 R 10 0.7692 0.766 0.589 NA NA

Total matches= 11 (8 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAACAAAgcmw

Sox6 MA0515.1 R 10 0.7692 0.774 0.596 NA NA

FOXD2 MA0847.4 D 11 0.8462 0.704 0.596 NA NA

Foxj3 MA0851.2 D 9 0.6923 0.857 0.593 NA NA

Total matches= 40 (37 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAACAAAgcmw

Sox4:UP00401A_1:UniPROBE Sox4/UP00401A_1/UniPROBE D 13 0.9286 0.833 0.774 NA NA

Sox11:MA0869.2:JASPAR Sox11/MA0869.2/JASPAR D 12 0.9231 0.811 0.749 NA NA

SOX10:MA0442.2:JASPAR SOX10/MA0442.2/JASPAR D 11 0.8462 0.878 0.743 NA NA

Total matches= 379 (376 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 461 (26.10%)
Max nb of predicted sites per peak: 46
(Interval_4726)
Mean nb of predicted sites per peak: 2.39

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv3_m4

k-mer sig=26.56; evalue=2.8e-27

mmcacaGTGACTCAgcmw

WKGCTGAGTCACTGTGKK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmcacaGTGACTCAgcmw

homer_192_Nrf2 homer_192_Nrf2 R 12 0.6667 0.864 0.576 NA NA

homer_141_GATGACTCATCN homer_141_GATGACTCATCN D 12 0.6667 0.835 0.557 NA NA

homer_179_GATGACTCAGCA homer_179_GATGACTCAGCA D 12 0.6667 0.835 0.556 NA NA

Total matches= 14 (11 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmcacaGTGACTCAgcmw

Bach1::Mafk MA0591.2 D 12 0.6667 0.841 0.561 NA NA

Mafg MA0659.4 D 12 0.6667 0.809 0.539 NA NA

MAF::NFE2 MA0501.2 D 11 0.6111 0.867 0.530 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmcacaGTGACTCAgcmw

Bach1::Mafk:MA0591.1:JASPAR Bach1::Mafk/MA0591.1/JASPAR D 15 0.8333 0.823 0.686 NA NA

Nfe2l2:MA0150.2:JASPAR Nfe2l2/MA0150.2/JASPAR D 15 0.8333 0.822 0.685 NA NA

NFE2_HUMAN.H10MO.B|M01361:NFE2_HUMAN.H10MO.B|M01361:HOCOMOCO NFE2_HUMAN.H10MO.B|M01361/NFE2_HUMAN.H10MO.B|M01361/HOCOMOCO D 14 0.7778 0.846 0.658 NA NA

Total matches= 125 (122 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 246 (13.93%)
Max nb of predicted sites per peak: 4
(Interval_5742)
Mean nb of predicted sites per peak: 1.12

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv3_m5

k-mer sig=39.78; evalue=1.7e-40

csygggGCCCCGCCCCrcCCcvcc

GGBGGGGYGGGGCGGGGCCCCRSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc

homer_146_KLF3 homer_146_KLF3 D 15 0.6250 0.771 0.482 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.5000 0.961 0.480 NA NA

homer_145_KLF14 homer_145_KLF14 R 12 0.5000 0.816 0.408 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc

PATZ1 MA1961.2 R 11 0.4583 0.903 0.414 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc

SP2_HUMAN.H10MO.C|M01525:SP2_HUMAN.H10MO.C|M01525:HOCOMOCO SP2_HUMAN.H10MO.C|M01525/SP2_HUMAN.H10MO.C|M01525/HOCOMOCO R 22 0.9167 0.829 0.760 NA NA

SP3:SP3_HUMAN.H10MO.B|M01526:HOCOMOCO SP3/SP3_HUMAN.H10MO.B|M01526/HOCOMOCO R 20 0.8333 0.830 0.692 NA NA

KLF1_REF_R1:UP00599A_2:UniPROBE KLF1_REF_R1/UP00599A_2/UniPROBE D 22 0.9167 0.737 0.675 NA NA

Total matches= 55 (52 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 266 (15.06%)
Max nb of predicted sites per peak: 89
(Interval_13)
Mean nb of predicted sites per peak: 9.93

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt_m1

k-mer sig=300; evalue=1e-300

sssgGaGGCCCCaGGGGCCCrssg

CSSYGGGCCCCTGGGGCCTCCSSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

PLAG1 MA0163.1 D 14 0.5833 0.726 0.423 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot D 14 0.5833 0.776 0.453 NA NA

TCP11_Mo17_1:EEAD0513:EEADannot TCP11_Mo17_1/EEAD0513/EEADannot R 15 0.6250 0.711 0.445 NA NA

PLAG1:MA0163.1:JASPAR PLAG1/MA0163.1/JASPAR D 14 0.5833 0.726 0.423 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 232 (13.14%)
Max nb of predicted sites per peak: 83
(Interval_6573)
Mean nb of predicted sites per peak: 8.38

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 positions_6nt_m2

k-mer sig=300; evalue=1e-300

ssmaGAGGCCCCAGGGgCCCmgsg

CSCKGGGCCCCTGGGGCCTCTKSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.814 0.407 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

ZNF320 MA1976.2 R 20 0.8333 0.714 0.595 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.715 0.417 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

ZNF320:MA1976.2:JASPAR ZNF320/MA1976.2/JASPAR R 20 0.8333 0.714 0.595 NA NA

ZNF320:MA1976.1:JASPAR ZNF320/MA1976.1/JASPAR R 23 0.8214 0.702 0.577 NA NA

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot D 14 0.5833 0.737 0.430 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 218 (12.34%)
Max nb of predicted sites per peak: 53
(Interval_5818)
Mean nb of predicted sites per peak: 4.79

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 positions_6nt_m3

k-mer sig=300; evalue=1e-300

ssgCCCCaGGGGCCCCcbggggss

SSCCCCVGGGGGCCCCTGGGGCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.807 0.404 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss

ZNF320 MA1976.2 R 17 0.6296 0.773 0.486 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.744 0.434 NA NA

TFAP2C MA0815.1 R 13 0.5417 0.776 0.420 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss

Plagl1:PB0052.1:JASPAR Plagl1/PB0052.1/JASPAR R 16 0.6667 0.744 0.496 NA NA

Plagl1:UP00088A_1:UniPROBE Plagl1/UP00088A_1/UniPROBE R 16 0.6667 0.743 0.496 NA NA

ZNF320:MA1976.2:JASPAR ZNF320/MA1976.2/JASPAR R 17 0.6296 0.773 0.486 NA NA

Total matches= 21 (18 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 248 (14.04%)
Max nb of predicted sites per peak: 127
(Interval_6573)
Mean nb of predicted sites per peak: 11.98

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 positions_6nt_m4

k-mer sig=300; evalue=1e-300

cssvGGgCCCCaGgGGCCTCcsss

SSSGGAGGCCCCTGGGGCCCBSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

PLAG1 MA0163.1 D 14 0.5833 0.706 0.412 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot R 14 0.5833 0.747 0.436 NA NA

TCP3_BAD1_WAB_B73_1_m1:EEAD0520:EEADannot TCP3_BAD1_WAB_B73_1_m1/EEAD0520/EEADannot D 14 0.5600 0.736 0.412 NA NA

PLAG1:MA0163.1:JASPAR PLAG1/MA0163.1/JASPAR D 14 0.5833 0.706 0.412 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 224 (12.68%)
Max nb of predicted sites per peak: 89
(Interval_6573)
Mean nb of predicted sites per peak: 9.04

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 positions_6nt_m5

k-mer sig=300; evalue=1e-300

sscskGGGcCCCaGgGGCCTCrsg

CSYGAGGCCCCTGGGGCCCMSGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

PLAG1 MA0163.1 D 14 0.5833 0.703 0.410 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

TCP3_BAD1_WAB_B73_1_m1:EEAD0520:EEADannot TCP3_BAD1_WAB_B73_1_m1/EEAD0520/EEADannot D 15 0.6250 0.741 0.463 NA NA

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot R 14 0.5833 0.750 0.437 NA NA

TCP11_B73_1_m1:EEAD0512:EEADannot TCP11_B73_1_m1/EEAD0512/EEADannot D 14 0.5600 0.744 0.417 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 236 (13.36%)
Max nb of predicted sites per peak: 65
(Interval_6573)
Mean nb of predicted sites per peak: 6.79

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv4_m1

k-mer sig=27.06; evalue=8.7e-28

rmAGAGGCCChg

CDGGGCCTCTKY

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAGAGGCCChg

homer_311_ZFX homer_311_ZFX D 8 0.6667 0.814 0.543 NA NA

homer_331_ZNF711 homer_331_ZNF711 D 8 0.6667 0.800 0.533 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAGAGGCCChg

ZNF692 MA1986.2 D 8 0.6667 0.782 0.521 NA NA

Zfx MA0146.3 R 8 0.5714 0.880 0.503 NA NA

ZNF770 MA2099.1 R 8 0.6667 0.749 0.499 NA NA

Total matches= 10 (7 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAGAGGCCChg

NCU05061:UN0091.1:JASPAR NCU05061/UN0091.1/JASPAR D 10 0.8333 0.939 0.783 NA NA

ZNF770:UN0225.1:JASPAR ZNF770/UN0225.1/JASPAR R 12 1.0000 0.730 0.730 NA NA

NCU05024:M0476_1.02:CISBP NCU05024/M0476_1.02/CISBP D 10 0.8333 0.866 0.722 NA NA

Total matches= 48 (45 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 443 (25.08%)
Max nb of predicted sites per peak: 13
(Interval_10828)
Mean nb of predicted sites per peak: 1.23

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_mkv4_m2

k-mer sig=19.40; evalue=4e-20

csCCCCACCCCccc

GGGGGGGTGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCACCCCccc

homer_146_KLF3 homer_146_KLF3 D 14 0.9333 0.855 0.798 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.8571 0.830 0.711 NA NA

homer_145_KLF14 homer_145_KLF14 R 12 0.8571 0.819 0.702 NA NA

Total matches= 11 (8 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCACCCCccc

PATZ1 MA1961.2 R 11 0.7857 0.930 0.731 NA NA

KLF5 MA0599.1 D 10 0.7143 0.920 0.657 NA NA

ZNF281 MA1630.3 R 10 0.7143 0.897 0.641 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCACCCCccc

CG7368:CG7368_SOLEXA_2.5_FBgn0036179:FlyZincFinger CG7368/CG7368_SOLEXA_2.5_FBgn0036179/FlyZincFinger R 14 0.9333 0.890 0.830 NA NA

ZNF467:UN0326.1:JASPAR ZNF467/UN0326.1/JASPAR D 14 0.9333 0.877 0.819 NA NA

KLF4:MA0039.4:JASPAR KLF4/MA0039.4/JASPAR D 12 0.8571 0.951 0.815 NA NA

Total matches= 330 (327 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 437 (24.75%)
Max nb of predicted sites per peak: 15
(Interval_4719)
Mean nb of predicted sites per peak: 2.55

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_mkv4_m3

k-mer sig=15.42; evalue=3.8e-16

csCCCCTCCCccc

GGGGGGAGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCTCCCccc

homer_325_ZNF467 homer_325_ZNF467 R 12 0.9231 0.831 0.767 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.9231 0.819 0.756 NA NA

homer_145_KLF14 homer_145_KLF14 R 12 0.9231 0.807 0.745 NA NA

Total matches= 7 (4 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCTCCCccc

PATZ1 MA1961.2 R 11 0.8462 0.949 0.803 NA NA

ZNF148 MA1653.2 D 10 0.7692 0.986 0.758 NA NA

ZNF281 MA1630.3 R 10 0.7692 0.937 0.721 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCTCCCccc

ZNF148:MA1653.1:JASPAR ZNF148/MA1653.1/JASPAR D 12 0.9231 0.985 0.909 NA NA

PATZ1:MA1961.1:JASPAR PATZ1/MA1961.1/JASPAR R 12 0.9231 0.948 0.875 NA NA

ZNF281:MA1630.2:JASPAR ZNF281/MA1630.2/JASPAR R 12 0.9231 0.936 0.864 NA NA

Total matches= 273 (270 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 432 (24.46%)
Max nb of predicted sites per peak: 13
(Interval_6573)
Mean nb of predicted sites per peak: 1.88

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_mkv4_m4

k-mer sig=14.47; evalue=3.4e-15

drTGACTCAyw

WRTGAGTCAYH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor drTGACTCAyw

homer_1_ATGACTCATC homer_1_ATGACTCATC D 10 0.9091 0.971 0.883 NA NA

homer_86_Fosl2 homer_86_Fosl2 R 11 0.9167 0.957 0.877 NA NA

homer_99_Fra2 homer_99_Fra2 D 11 0.9167 0.956 0.877 NA NA

Total matches= 14 (11 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor drTGACTCAyw

FOSL2 MA0478.2 D 10 0.9091 0.957 0.870 NA NA

BACH2 MA1101.3 D 11 1.0000 0.866 0.866 NA NA

NFE2 MA0841.2 D 10 0.9091 0.895 0.813 NA NA

Total matches= 35 (32 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor drTGACTCAyw

Atf3:MA1988.1:JASPAR Atf3/MA1988.1/JASPAR D 11 1.0000 0.995 0.995 NA NA

Fosb:UN0673.1:JASPAR Fosb/UN0673.1/JASPAR D 11 1.0000 0.992 0.992 NA NA

Fosl1:FOSL1_MOUSE.H10MO.C|M01091:HOCOMOCO Fosl1/FOSL1_MOUSE.H10MO.C|M01091/HOCOMOCO D 11 1.0000 0.989 0.989 NA NA

Total matches= 287 (284 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 397 (22.48%)
Max nb of predicted sites per peak: 3
(Interval_6542)
Mean nb of predicted sites per peak: 1.20

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_mkv4_m5

k-mer sig=13.63; evalue=2.3e-14

ssgCCCCGCCCCgss

SSCGGGGCGGGGCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCGCCCCgss

homer_146_KLF3 homer_146_KLF3 D 15 1.0000 0.789 0.789 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.8000 0.927 0.741 NA NA

homer_145_KLF14 homer_145_KLF14 R 12 0.8000 0.784 0.627 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCGCCCCgss

PATZ1 MA1961.2 R 11 0.7333 0.901 0.661 NA NA

ZBED4 MA2328.1 D 10 0.6667 0.927 0.618 NA NA

KLF5 MA0599.1 D 10 0.6667 0.892 0.595 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCGCCCCgss

ZNF467:UN0326.1:JASPAR ZNF467/UN0326.1/JASPAR D 15 1.0000 0.770 0.770 NA NA

GC:POL003.1:JASPAR GC/POL003.1/JASPAR R 14 0.9333 0.820 0.765 NA NA

Klf7:PB0039.1:JASPAR Klf7/PB0039.1/JASPAR D 15 0.9375 0.781 0.732 NA NA

Total matches= 220 (217 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 293 (16.59%)
Max nb of predicted sites per peak: 60
(Interval_13)
Mean nb of predicted sites per peak: 7.28

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_7nt_m1

k-mer sig=300; evalue=1e-300

crsaGAGGCCcCtGGGGcCCCcbb

VVGGGGGCCCCAGGGGCCTCTSYG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.811 0.406 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

ZNF320 MA1976.2 R 20 0.8333 0.771 0.643 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.760 0.443 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

ZNF320:MA1976.2:JASPAR ZNF320/MA1976.2/JASPAR R 20 0.8333 0.771 0.643 NA NA

ZNF320:MA1976.1:JASPAR ZNF320/MA1976.1/JASPAR R 23 0.8214 0.766 0.629 NA NA

PLAG1:MA0163.1:JASPAR PLAG1/MA0163.1/JASPAR R 14 0.5833 0.760 0.443 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 217 (12.29%)
Max nb of predicted sites per peak: 42
(Interval_5818)
Mean nb of predicted sites per peak: 4.32

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_7nt_m2

k-mer sig=300; evalue=1e-300

smggGaGGCCcCTGGGgCCCCask

MSTGGGGCCCCAGGGGCCTCCCKS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.816 0.408 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

PLAG1 MA0163.1 R 14 0.5833 0.762 0.444 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

PLAG1:MA0163.1:JASPAR PLAG1/MA0163.1/JASPAR R 14 0.5833 0.762 0.444 NA NA

Plagl1:MA1615.1:JASPAR Plagl1/MA1615.1/JASPAR D 13 0.5417 0.740 0.401 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 210 (11.89%)
Max nb of predicted sites per peak: 44
(Interval_5818)
Mean nb of predicted sites per peak: 4.70

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_7nt_m3

k-mer sig=300; evalue=1e-300

sstGGGGCCCCtGGgGGCCmsgsg

CSCSKGGCCCCCAGGGGCCCCASS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

PLAG1 MA0163.1 D 14 0.5833 0.834 0.487 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

PLAG1:MA0163.1:JASPAR PLAG1/MA0163.1/JASPAR D 14 0.5833 0.834 0.487 NA NA

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot D 14 0.5833 0.769 0.448 NA NA

sug:M5219_1.02:CISBP sug/M5219_1.02/CISBP D 14 0.5833 0.713 0.416 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 237 (13.42%)
Max nb of predicted sites per peak: 55
(Interval_5818)
Mean nb of predicted sites per peak: 5.39

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_7nt_m4

k-mer sig=300; evalue=1e-300

ssgGGaGGCCcCaGGGGCCCrgss

SSCYGGGCCCCTGGGGCCTCCCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

PLAG1 MA0163.1 D 14 0.5833 0.717 0.418 NA NA

ZNF454 MA1712.2 R 15 0.5769 0.703 0.405 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

TCP15_Mo17_1:EEAD0515:EEADannot TCP15_Mo17_1/EEAD0515/EEADannot D 14 0.5833 0.789 0.461 NA NA

TCP11_Mo17_1:EEAD0513:EEADannot TCP11_Mo17_1/EEAD0513/EEADannot R 15 0.6250 0.715 0.447 NA NA

TCP3_BAD1_WAB_B73_1_m1:EEAD0520:EEADannot TCP3_BAD1_WAB_B73_1_m1/EEAD0520/EEADannot R 14 0.5600 0.752 0.421 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 226 (12.80%)
Max nb of predicted sites per peak: 80
(Interval_6573)
Mean nb of predicted sites per peak: 8.42

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_7nt_m5

k-mer sig=300; evalue=1e-300

cssAGAGGCCTCCcbgss

SSCVGGGAGGCCTCTSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Zfx MA0146.3 D 10 0.5556 0.765 0.425 NA NA

Wt1 MA1627.2 D 10 0.5556 0.739 0.411 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

NCU05061:UN0091.1:JASPAR NCU05061/UN0091.1/JASPAR R 10 0.5556 0.883 0.491 NA NA

NCU05024:M0476_1.02:CISBP NCU05024/M0476_1.02/CISBP R 10 0.5556 0.808 0.449 NA NA

ZNF783:UN0658.1:JASPAR ZNF783/UN0658.1/JASPAR D 11 0.6111 0.725 0.443 NA NA

Total matches= 13 (10 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 249 (14.10%)
Max nb of predicted sites per peak: 11
(Interval_13)
Mean nb of predicted sites per peak: 1.77

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 21 dyads_m1

k-mer sig=223.17; evalue=6.8e-224

vsAGAGGCCcs

SGGGCCTCTSB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vsAGAGGCCcs

homer_331_ZNF711 homer_331_ZNF711 R 8 0.7273 0.769 0.559 NA NA

homer_311_ZFX homer_311_ZFX D 7 0.5833 0.906 0.529 NA NA

homer_326_ZNF519 homer_326_ZNF519 D 8 0.6154 0.763 0.470 NA NA

Total matches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vsAGAGGCCcs

ZNF770 MA2099.1 R 8 0.7273 0.806 0.586 NA NA

Prdm14 MA1998.2 R 8 0.7273 0.709 0.516 NA NA

Zfx MA0146.3 R 7 0.5000 0.978 0.489 NA NA

Total matches= 8 (5 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vsAGAGGCCcs

NCU05061:UN0091.1:JASPAR NCU05061/UN0091.1/JASPAR D 10 0.9091 0.953 0.867 NA NA

NCU05024:M0476_1.02:CISBP NCU05024/M0476_1.02/CISBP D 10 0.9091 0.893 0.812 NA NA

NCU05022:M0475_1.02:CISBP NCU05022/M0475_1.02/CISBP D 9 0.8182 0.906 0.741 NA NA

Total matches= 46 (43 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 424 (24.01%)
Max nb of predicted sites per peak: 6
(Interval_548)
Mean nb of predicted sites per peak: 1.21

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 22 dyads_m2

k-mer sig=131.00; evalue=1e-131

cgGGCCCCACCCtss

SSAGGGTGGGGCCCG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cgGGCCCCACCCtss

homer_146_KLF3 homer_146_KLF3 D 14 0.8750 0.883 0.773 NA NA

homer_65_EKLF homer_65_EKLF R 12 0.8000 0.819 0.655 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.8000 0.815 0.652 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cgGGCCCCACCCtss

KLF5 MA0599.1 D 10 0.6667 0.926 0.618 NA NA

PATZ1 MA1961.2 R 11 0.7333 0.834 0.611 NA NA

KLF9 MA1107.3 D 11 0.7333 0.765 0.561 NA NA

Total matches= 27 (24 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cgGGCCCCACCCtss

CG12029:CG12029_SOLEXA_5_FBgn0035454:FlyZincFinger CG12029/CG12029_SOLEXA_5_FBgn0035454/FlyZincFinger R 15 1.0000 0.789 0.789 NA NA

CG5669:M4870_1.02:CISBP CG5669/M4870_1.02/CISBP R 15 1.0000 0.765 0.765 NA NA

CG5669:CG5669_SANGER_10_FBgn0039169:FlyZincFinger CG5669/CG5669_SANGER_10_FBgn0039169/FlyZincFinger R 15 1.0000 0.764 0.764 NA NA

Total matches= 274 (271 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 365 (20.67%)
Max nb of predicted sites per peak: 9
(Interval_5890)
Mean nb of predicted sites per peak: 1.63

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 23 dyads_m3

k-mer sig=131.00; evalue=1e-131

ssGGCCCCAGCCCtss

SSAGGGCTGGGGCCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssGGCCCCAGCCCtss

homer_146_KLF3 homer_146_KLF3 D 15 0.9375 0.701 0.657 NA NA

homer_266_Sp1 homer_266_Sp1 D 12 0.7500 0.733 0.550 NA NA

homer_330_ZNF692 homer_330_ZNF692 D 9 0.5294 0.843 0.447 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssGGCCCCAGCCCtss

PATZ1 MA1961.2 R 11 0.6875 0.753 0.518 NA NA

KLF5 MA0599.1 D 10 0.6250 0.753 0.471 NA NA

Plagl1 MA1615.2 R 8 0.5000 0.926 0.463 NA NA

Total matches= 15 (12 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssGGCCCCAGCCCtss

SP1:SP1_HUMAN.H10MO.C|M01523:HOCOMOCO SP1/SP1_HUMAN.H10MO.C|M01523/HOCOMOCO R 16 0.8421 0.712 0.600 NA NA

Plagl1:MA1615.1:JASPAR Plagl1/MA1615.1/JASPAR R 12 0.7059 0.827 0.584 NA NA

PATZ1:M3546_1.02:CISBP PATZ1/M3546_1.02/CISBP R 13 0.8125 0.719 0.584 NA NA

Total matches= 83 (80 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 302 (17.10%)
Max nb of predicted sites per peak: 23
(Interval_13)
Mean nb of predicted sites per peak: 2.58

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 24 dyads_m4

k-mer sig=124.69; evalue=2e-125

aaAAAAAAAmAAAaa

TTTTTKTTTTTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAAAAmAAAaa

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAAAAmAAAaa

FOXD3 MA0041.3 D 14 0.9333 0.719 0.671 NA NA

FOXE1 MA1487.3 D 12 0.8000 0.752 0.602 NA NA

FOXD2 MA0847.4 D 11 0.7333 0.733 0.537 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAAAAmAAAaa

REM19.DAP:M0725:AthalianaCistrome REM19.DAP/M0725/AthalianaCistrome D 15 1.0000 0.922 0.922 NA NA

CG11352:jim_F1-9_SOLEXA_2.5_FBgn0027339:FlyZincFinger CG11352/jim_F1-9_SOLEXA_2.5_FBgn0027339/FlyZincFinger D 15 1.0000 0.865 0.865 NA NA

jim:M5048_1.02:CISBP jim/M5048_1.02/CISBP D 15 1.0000 0.865 0.865 NA NA

Total matches= 192 (189 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 418 (23.67%)
Max nb of predicted sites per peak: 63
(Interval_4726)
Mean nb of predicted sites per peak: 7.55

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 25 dyads_m5

k-mer sig=111.64; evalue=2.3e-112

ssCTCTGCyb

VRGCAGAGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCTCTGCyb

Total matches= 0

No match

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCTCTGCyb

ZNF331 MA1726.2 R 9 0.8182 0.859 0.703 NA NA

ZNF317 MA1593.2 R 7 0.6364 0.846 0.538 NA NA

ZNF768 MA1731.2 D 7 0.5833 0.895 0.522 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

footprintDB

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCTCTGCyb

ZNF554:UN0630.1:JASPAR ZNF554/UN0630.1/JASPAR R 10 0.9091 0.916 0.833 NA NA

ZNF548:UN0333.1:JASPAR ZNF548/UN0333.1/JASPAR D 10 1.0000 0.735 0.735 NA NA

ZNF331:MA1726.2:JASPAR ZNF331/MA1726.2/JASPAR R 9 0.8182 0.859 0.703 NA NA

Total matches= 41 (38 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 180 (10.19%)
Max nb of predicted sites per peak: 10
(Interval_6229)
Mean nb of predicted sites per peak: 1.13

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus Homer database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]
Motifs versus footprintDB database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: Plag1_all_peaks_centered (10/07/2026 19:49)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

homer_146_KLF3 homer_146_KLF3 D 15 0.6250 0.774 0.484 NA NA

homer_266_Sp1 homer_266_Sp1 R 12 0.5000 0.863 0.431 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

PATZ1 MA1961.2 R 11 0.4583 0.882 0.404 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc

PATZ1 MA1961.2 R 11 0.4583 0.903 0.414 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

PLAG1 MA0163.1 D 14 0.5833 0.726 0.423 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.814 0.407 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

ZNF320 MA1976.2 R 20 0.8333 0.714 0.595 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.715 0.417 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.807 0.404 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

PLAG1 MA0163.1 D 14 0.5833 0.706 0.412 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

PLAG1 MA0163.1 D 14 0.5833 0.703 0.410 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAGAGGCCChg

homer_311_ZFX homer_311_ZFX D 8 0.6667 0.814 0.543 NA NA

homer_331_ZNF711 homer_331_ZNF711 D 8 0.6667 0.800 0.533 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.811 0.406 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

ZNF320 MA1976.2 R 20 0.8333 0.771 0.643 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.760 0.443 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.816 0.408 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

PLAG1 MA0163.1 R 14 0.5833 0.762 0.444 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

PLAG1 MA0163.1 D 14 0.5833 0.834 0.487 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

PLAG1 MA0163.1 D 14 0.5833 0.717 0.418 NA NA

ZNF454 MA1712.2 R 15 0.5769 0.703 0.405 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Zfx MA0146.3 D 10 0.5556 0.765 0.425 NA NA

Wt1 MA1627.2 D 10 0.5556 0.739 0.411 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAAAAmAAAaa

Total matches= 0

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCTCTGCyb

Total matches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: Plag1_all_peaks_centered (10/07/2026 19:49)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sssgGggtGGGGCCCCaccCccss homer_146_KLF3 homer_146_KLF3 D 15 0.6250 0.774 0.484 NA NA homer_266_Sp1 homer_266_Sp1 R 12 0.5000 0.863 0.431 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sssgGggtGGGGCCCCaccCccss PATZ1 MA1961.2 R 11 0.4583 0.882 0.404 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc PATZ1 MA1961.2 R 11 0.4583 0.903 0.414 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg PLAG1 MA0163.1 D 14 0.5833 0.726 0.423 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.814 0.407 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg ZNF320 MA1976.2 R 20 0.8333 0.714 0.595 NA NA PLAG1 MA0163.1 D 14 0.5833 0.715 0.417 NA NA Total matches= 2

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.807 0.404 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss PLAG1 MA0163.1 D 14 0.5833 0.706 0.412 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg PLAG1 MA0163.1 D 14 0.5833 0.703 0.410 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor rmAGAGGCCChg homer_311_ZFX homer_311_ZFX D 8 0.6667 0.814 0.543 NA NA homer_331_ZNF711 homer_331_ZNF711 D 8 0.6667 0.800 0.533 NA NA Total matches= 2

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.811 0.406 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb ZNF320 MA1976.2 R 20 0.8333 0.771 0.643 NA NA PLAG1 MA0163.1 R 14 0.5833 0.760 0.443 NA NA Total matches= 2

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.816 0.408 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask PLAG1 MA0163.1 R 14 0.5833 0.762 0.444 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg PLAG1 MA0163.1 D 14 0.5833 0.834 0.487 NA NA Total matches= 1

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss PLAG1 MA0163.1 D 14 0.5833 0.717 0.418 NA NA ZNF454 MA1712.2 R 15 0.5769 0.703 0.405 NA NA Total matches= 2

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssAGAGGCCTCCcbgss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssAGAGGCCTCCcbgss Zfx MA0146.3 D 10 0.5556 0.765 0.425 NA NA Wt1 MA1627.2 D 10 0.5556 0.739 0.411 NA NA Total matches= 2

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor aaAAAAAAAmAAAaa Total matches= 0

Homer name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssCTCTGCyb Total matches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

homer_146_KLF3 homer_146_KLF3 D 15 0.6250 0.774 0.484 NA NA

homer_266_Sp1 homer_266_Sp1 R 12 0.5000 0.863 0.431 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGggtGGGGCCCCaccCccss

PATZ1 MA1961.2 R 11 0.4583 0.882 0.404 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csygggGCCCCGCCCCrcCCcvcc

PATZ1 MA1961.2 R 11 0.4583 0.903 0.414 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssgGaGGCCCCaGGGGCCCrssg

PLAG1 MA0163.1 D 14 0.5833 0.726 0.423 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.814 0.407 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmaGAGGCCCCAGGGgCCCmgsg

ZNF320 MA1976.2 R 20 0.8333 0.714 0.595 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.715 0.417 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCCCCaGGGGCCCCcbggggss

homer_59_EBF1 homer_59_EBF1 D 12 0.5000 0.807 0.404 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssvGGgCCCCaGgGGCCTCcsss

PLAG1 MA0163.1 D 14 0.5833 0.706 0.412 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscskGGGcCCCaGgGGCCTCrsg

PLAG1 MA0163.1 D 14 0.5833 0.703 0.410 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor rmAGAGGCCChg

homer_311_ZFX homer_311_ZFX D 8 0.6667 0.814 0.543 NA NA

homer_331_ZNF711 homer_331_ZNF711 D 8 0.6667 0.800 0.533 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.811 0.406 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor crsaGAGGCCcCtGGGGcCCCcbb

ZNF320 MA1976.2 R 20 0.8333 0.771 0.643 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.760 0.443 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

homer_59_EBF1 homer_59_EBF1 R 12 0.5000 0.816 0.408 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor smggGaGGCCcCTGGGgCCCCask

PLAG1 MA0163.1 R 14 0.5833 0.762 0.444 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sstGGGGCCCCtGGgGGCCmsgsg

PLAG1 MA0163.1 D 14 0.5833 0.834 0.487 NA NA

Total matches= 1

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgGGaGGCCcCaGGGGCCCrgss

PLAG1 MA0163.1 D 14 0.5833 0.717 0.418 NA NA

ZNF454 MA1712.2 R 15 0.5769 0.703 0.405 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssAGAGGCCTCCcbgss

Zfx MA0146.3 D 10 0.5556 0.765 0.425 NA NA

Wt1 MA1627.2 D 10 0.5556 0.739 0.411 NA NA

Total matches= 2

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAAAAmAAAaa

Total matches= 0

Homer

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCTCTGCyb

Total matches= 0