; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	63	94	7	152	163	11	32	168	39	65
c	30	19	1	0	4	6	0	7	32	27
g	28	31	6	0	6	2	0	1	19	28
t	63	40	170	32	11	165	152	8	94	64
//
; Sites	184
>site_0
TTTAAATAAG
>site_1
CTTATTTAAA
>site_2
GATAATTATA
>site_3
TATAATTATC
>site_4
TATATTTAAA
>site_5
TTTAAATATA
>site_6
TATTATTAGC
>site_7
GCTAATAATA
>site_8
TATTATTACT
>site_9
AGTAATAATA
>site_10
TATTATTAAA
>site_11
TTTAATAATA
>site_12
AATAATTATG
>site_13
CATAATTATT
>site_14
TATAATTCCA
>site_15
TGGAATTATA
>site_16
TTTAATTACC
>site_17
GGTAATTAAA
>site_18
CCCAATTATA
>site_19
TATAATTGGG
>site_20
CGTACTTAGA
>site_21
CGTAAGTATT
>site_22
AATACTTACG
>site_23
GATTATTAGG
>site_24
CCTAATAATC
>site_25
GATAATTATA
>site_26
TATAATTATC
>site_27
TGTAATTATC
>site_28
GATAATTACA
>site_29
GGTATTTACT
>site_30
AGTAAATACC
>site_31
AATAATAAAT
>site_32
ATTTATTATT
>site_33
CATAATTACA
>site_34
TGTAATTATG
>site_35
CATAAATATA
>site_36
TATATTTATG
>site_37
AGTAATTTAT
>site_38
ATAAATTACT
>site_39
TTTATTTAAA
>site_40
TTTAAATAAA
>site_41
TAAAATTATT
>site_42
AATAATTTTA
>site_43
AATTATTATT
>site_44
AATAATAATT
>site_45
TATTATTAGA
>site_46
TCTAATAATA
>site_47
TAGAATTATA
>site_48
TATAATTCTA
>site_49
GTTAATTTTA
>site_50
AATAATTAGA
>site_51
TCTAATTATT
>site_52
CCTAATAATC
>site_53
GATTATTAGG
>site_54
ATTAATAATA
>site_55
TATTATTAAT
>site_56
AATAATAAAA
>site_57
TTTTATTATT
>site_58
AGTAATTAGA
>site_59
TCTAATTACT
>site_60
AGTAAATACC
>site_61
GGTATTTACT
>site_62
GATAATTTAT
>site_63
ATAAATTATC
>site_64
AGTAATTATA
>site_65
TATAATTACT
>site_66
CGTAACTAGG
>site_67
CCTAGTTACG
>site_68
AATTATTATT
>site_69
AATAATAATT
>site_70
CATAATTATC
>site_71
GATAATTATG
>site_72
TTTATTTAAT
>site_73
ATTAAATAAA
>site_74
AATAAATAAC
>site_75
GTTATTTATT
>site_76
AATAATTTTA
>site_77
TAAAATTATT
>site_78
AATATTTATT
>site_79
AATAAATATT
>site_80
ATTTATTATA
>site_81
TATAATAAAT
>site_82
TATACTTACA
>site_83
TATAAATAAT
>site_84
ATTATTTATA
>site_85
TCTAGTTATA
>site_86
TATAACTAGA
>site_87
GATAGTTAGG
>site_88
CCTAACTATC
>site_89
TATTATTATT
>site_90
AATAATAATA
>site_91
TATTATTATT
>site_92
AATAATAATA
>site_93
GCTAATTAAC
>site_94
GTTAATTAGC
>site_95
AATACTTACG
>site_96
CGTAAGTATT
>site_97
TCTTATTACG
>site_98
CGTAATAAGA
>site_99
ATTTATTATA
>site_100
TATAATAAAT
>site_101
ATAAATTACG
>site_102
CGTAATTTAT
>site_103
GATAATTATG
>site_104
CATAATTATC
>site_105
AATAATTACC
>site_106
GGTAATTATT
>site_107
CGTAATTAAA
>site_108
TTTAATTACG
>site_109
TATAATTCTT
>site_110
AAGAATTATA
>site_111
AATAATTTAA
>site_112
TTAAATTATT
>site_113
TATAATAATA
>site_114
TATTATTATA
>site_115
TATAGTTACT
>site_116
AGTAACTATA
>site_117
GCTAATTAAT
>site_118
ATTAATTAGC
>site_119
AATAATTAAT
>site_120
ATTAATTATT
>site_121
CCTAATTCCT
>site_122
CGTAACTAAT
>site_123
ATTAGTTACG
>site_124
AATAATTAAG
>site_125
CTTAATTATT
>site_126
CATAATTACT
>site_127
AGTAATTATG
>site_128
CGGAATTATA
>site_129
TATAATTCCG
>site_130
CTTAATAATT
>site_131
AATTATTAAG
>site_132
AATAATTAAC
>site_133
GTTAATTATT
>site_134
ATTTATTATC
>site_135
GATAATAAAT
>site_136
CTTTATTATA
>site_137
TATAATAAAG
>site_138
ATTAATAAAC
>site_139
GTTTATTAAT
>site_140
AGAAATTATA
>site_141
TATAATTTCT
>site_142
AATAATTATC
>site_143
GATAATTATT
>site_144
AATTATTAAG
>site_145
CTTAATAATT
>site_146
ATTAATTATG
>site_147
CATAATTAAT
>site_148
AATAATAAAC
>site_149
GTTTATTATT
>site_150
TGTAATAATA
>site_151
TATTATTACA
>site_152
AATAATAATT
>site_153
AATTATTATT
>site_154
AATAATTATT
>site_155
AATAATTATT
>site_156
GCTAATTATT
>site_157
AATAATTAGC
>site_158
TTTAATAATA
>site_159
TATTATTAAA
>site_160
AATAATAATT
>site_161
AATTATTATT
>site_162
TCTTATTAGA
>site_163
TCTAATAAGA
>site_164
ATTTATTACT
>site_165
AGTAATAAAT
>site_166
TATTATTAAA
>site_167
TTTAATAATA
>site_168
AATAACTAAT
>site_169
ATTAGTTATT
>site_170
CATAATTACA
>site_171
TGTAATTATG
>site_172
GCTAATTAGA
>site_173
TCTAATTAGC
>site_174
GATAATTCTA
>site_175
TAGAATTATC
>site_176
TATTATTATG
>site_177
CATAATAATA
>site_178
TATAATAACA
>site_179
TGTTATTATA
>site_180
AATAATTCTA
>site_181
TAGAATTATT
>site_182
CGTATTTACC
>site_183
GGTAAATACG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m1_rc.png
;
a	29	19	116	0	0	105	0	0	36	27
c	40	47	0	116	108	3	116	116	28	30
g	28	25	0	0	3	3	0	0	26	32
t	19	25	0	0	5	5	0	0	26	27
//
; Sites	116
>site_0
GTACGACCCC
>site_1
CCACCACCCT
>site_2
CGACCGCCGG
>site_3
AAACCACCCA
>site_4
AGACCACCAA
>site_5
TCACCACCCG
>site_6
GCACCACCTC
>site_7
TCACCACCGG
>site_8
CAACCACCTC
>site_9
GTACCACCTG
>site_10
TGACCACCCG
>site_11
GGACCACCAA
>site_12
TTACCCCCCA
>site_13
GCACCACCAG
>site_14
ACACCACCTT
>site_15
AAACCACCTT
>site_16
ACACCACCTT
>site_17
GTACCACCGT
>site_18
CGACCACCGG
>site_19
ATACTACCTT
>site_20
TTACGACCGA
>site_21
AGACCACCGG
>site_22
GCACCACCCA
>site_23
CCACCACCCT
>site_24
AAACCACCAC
>site_25
TTACCACCAT
>site_26
GTACTACCCG
>site_27
ACACCACCCA
>site_28
GAACTACCCG
>site_29
AGACCACCTC
>site_30
TTACCTCCCG
>site_31
ATACCACCCG
>site_32
AAACCACCCT
>site_33
GAACCACCAA
>site_34
TTACCACCAG
>site_35
GTACCACCAC
>site_36
CCACCACCAT
>site_37
GCACCACCTG
>site_38
GCACCACCGA
>site_39
TAACCTCCGA
>site_40
TTACCCCCGT
>site_41
GTACGACCCC
>site_42
CTACCACCAA
>site_43
CGACCGCCTA
>site_44
CCACCACCAC
>site_45
CCACCACCAG
>site_46
ACACCACCGA
>site_47
GGACCACCGT
>site_48
CCACCACCTA
>site_49
GCACCACCAG
>site_50
GGACCACCTG
>site_51
TCACCACCGT
>site_52
ACACCACCAG
>site_53
CCACCACCAA
>site_54
CCACCACCGC
>site_55
CGACCTCCCG
>site_56
GAACCACCAC
>site_57
AAACCACCTT
>site_58
ACACCACCGA
>site_59
GCACCACCCA
>site_60
TCACCACCTG
>site_61
AGACCACCCA
>site_62
ACACCACCTC
>site_63
CCACCACCTT
>site_64
CGACCACCGC
>site_65
AGACCACCCT
>site_66
CCACCACCAC
>site_67
CCACCACCAC
>site_68
CCACCACCAT
>site_69
CAACCACCAC
>site_70
GCACCACCAC
>site_71
CCACCACCGC
>site_72
CCACCACCAC
>site_73
CCACCACCAC
>site_74
CCACCACCAA
>site_75
AGACCACCTT
>site_76
GCACCACCAG
>site_77
CTACCACCCC
>site_78
TTACCACCTT
>site_79
GTACTACCCG
>site_80
CGACCGCCGG
>site_81
AGACCACCTG
>site_82
CTACCACCAA
>site_83
GGACCACCCG
>site_84
CGACCACCCA
>site_85
CTACCACCTT
>site_86
TAACCACCAC
>site_87
CCACCACCAC
>site_88
AAACCACCGA
>site_89
TCACCACCAA
>site_90
CTACTACCCC
>site_91
GGACCACCTC
>site_92
AAACCACCAG
>site_93
CGACCTCCGG
>site_94
CTACCACCAC
>site_95
CCACCACCAT
>site_96
CAACCACCGA
>site_97
GTACCCCCGG
>site_98
ACACCACCCT
>site_99
TCACCACCGT
>site_100
CAACCACCTT
>site_101
TCACCACCCT
>site_102
ACACCACCTA
>site_103
AGACCACCGG
>site_104
GGACCACCTT
>site_105
TGACCACCAT
>site_106
CTACCTCCGG
>site_107
TCACCACCAC
>site_108
CCACCACCAC
>site_109
CCACCACCGA
>site_110
AGACCACCTG
>site_111
AAACCACCTC
>site_112
GAACCACCAC
>site_113
CAACCACCCC
>site_114
GTACCACCGA
>site_115
ACACCACCCG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m2_rc.png
;
a	42	29	107	0	108	101	107	0	33	38
c	20	27	0	0	0	0	0	0	25	23
g	27	34	1	107	0	0	1	105	29	35
t	19	18	0	1	0	7	0	3	21	12
//
; Sites	108
>site_0
ATAGAAATAC
>site_1
ACAGAAAGGA
>site_2
AAAGAAAGAG
>site_3
AAAGAAAGAG
>site_4
GTAGATAGGA
>site_5
TGAGAAAGGA
>site_6
ACAGAAAGGA
>site_7
GCAGAAAGCG
>site_8
ATAGAAAGCA
>site_9
AGAGAAAGCA
>site_10
ACAGAAAGAG
>site_11
GCAGAAAGTC
>site_12
AGAGAAAGGT
>site_13
ACAGAAAGTG
>site_14
ACAGAAAGTG
>site_15
CAAGAAAGAT
>site_16
CGAGAAAGCT
>site_17
TTAGAAAGCC
>site_18
CAAGAAAGCG
>site_19
GGAGAAAGAG
>site_20
AGAGAAAGAG
>site_21
ATAGAAAGAC
>site_22
ACAGAAAGCG
>site_23
GAAGAAAGGT
>site_24
GGAGAAAGAA
>site_25
GCAGAAAGTG
>site_26
ATAGAAAGTG
>site_27
AAAGAAAGCA
>site_28
CGAGAAAGAA
>site_29
AGAGAAAGTA
>site_30
ATAGATAGGG
>site_31
ATAGAAAGGA
>site_32
GTAGAAAGGA
>site_33
ACAGAAAGAG
>site_34
TCAGAAAGGA
>site_35
GTAGATAGGT
>site_36
CCAGAAAGTT
>site_37
AGAGAAAGAA
>site_38
TAGGAAAGTA
>site_39
AAAGAAAGGC
>site_40
GGAGAAAGCA
>site_41
TGAGAAAGAC
>site_42
GCAGAAAGTG
>site_43
AGAGAAAGGA
>site_44
CAAGAAAGAA
>site_45
AAAGAAAGGC
>site_46
AGAGAAAGTC
>site_47
GGAGAAAGAC
>site_48
TCAGAAAGCC
>site_49
AAAGAAAGCG
>site_50
CAAGAAAGAC
>site_51
CGAGAAAGCG
>site_52
TCAGAAAGGT
>site_53
TGAGAAAGTA
>site_54
TTAGAAAGTG
>site_55
CGAGAAAGGA
>site_56
AAAGAAAGTG
>site_57
GGAGAAAGGG
>site_58
TCAGAAAGGT
>site_59
TAAGAAAGAT
>site_60
GCAGAAAGCA
>site_61
GAAGAAAGAC
>site_62
TGAGAAAGTA
>site_63
CTAGAAATAT
>site_64
GAAGAAAGAG
>site_65
ACAGAAAGAC
>site_66
ACAGAAAGAC
>site_67
CCAGAAAGGA
>site_68
GGAGAAAGAG
>site_69
TGAGAAAGGC
>site_70
ACAGAAAGAG
>site_71
GGAGATAGGG
>site_72
ATATAAAGCC
>site_73
TTAGATAGGG
>site_74
ACAGAAAGTC
>site_75
GGAGAAAGTG
>site_76
GGAGAAAGAG
>site_77
AGAGAAAGTG
>site_78
CAAGAAAGTA
>site_79
ACAGAAAGAC
>site_80
CAAGAAAGCA
>site_81
TAAGATAGGA
>site_82
CAAGAAAGCG
>site_83
AAAGAAAGTT
>site_84
AAAGAAAGAA
>site_85
AAAGAAAGGC
>site_86
GGAGAAAGCA
>site_87
TCAGAAAGCT
>site_88
GGAGAAAGCA
>site_89
GGAGAAAGGG
>site_90
GGAGAAAGGG
>site_91
CGAGAAAGCA
>site_92
GGAGAAAGGC
>site_93
ATAGAAATAG
>site_94
CAAGAAAGCA
>site_95
AAAGAAAGTA
>site_96
ACAGAAAGAG
>site_97
TCAGAAAGGC
>site_98
TGAGAAAGAG
>site_99
GCAGAAAGCC
>site_100
ATAGAAAGCA
>site_101
ATAGAAAGAA
>site_102
CGAGAAAGAC
>site_103
CAAGAAAGCA
>site_104
TAAGAAGGTA
>site_105
GAAGAAAGAG
>site_106
CTAGATAGGA
>site_107
CAAGAAAGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m3_rc.png
;
a	64	36	135	135	0	134	135	0	59	46
c	27	49	0	0	131	0	0	135	31	31
g	23	29	0	0	0	0	0	0	16	30
t	21	21	0	0	4	1	0	0	29	28
//
; Sites	135
>site_0
CGAATAACCC
>site_1
GGAACAACTC
>site_2
TGAACAACTC
>site_3
GTAACAACCG
>site_4
GAAACAACCT
>site_5
TGAACAACTC
>site_6
TCAACAACGA
>site_7
ACAACAACAT
>site_8
CCAACAACAA
>site_9
ACAACAACCT
>site_10
ACAACAACAC
>site_11
GCAACAACAC
>site_12
ATAACAACTT
>site_13
TAAACAACGC
>site_14
TCAACAACCG
>site_15
TAAACAACAA
>site_16
GTAACTACTA
>site_17
CCAACAACTT
>site_18
ATAATAACCG
>site_19
ATAACAACCT
>site_20
AAAACAACCC
>site_21
ATAACAACCA
>site_22
AGAACAACCT
>site_23
CCAACAACAC
>site_24
CTAACAACGG
>site_25
CTAACAACTA
>site_26
CTAACAACAC
>site_27
ACAACAACCA
>site_28
TAAACAACAA
>site_29
ACAACAACAT
>site_30
GGAACAACAA
>site_31
AGAACAACAT
>site_32
TAAACAACGT
>site_33
AGAACAACGA
>site_34
GCAACAACTT
>site_35
TGAACAACTA
>site_36
TGAACAACAA
>site_37
ACAACAACGA
>site_38
ATAACAACGA
>site_39
GAAACAACAG
>site_40
GCAACAACAA
>site_41
CAAACAACAC
>site_42
AGAACAACAG
>site_43
AAAACAACAC
>site_44
AGAACAACGG
>site_45
CAAACAACAG
>site_46
CAAACAACTT
>site_47
AGAACAACCG
>site_48
CCAACAACTG
>site_49
ACAACAACCA
>site_50
TCAACAACAC
>site_51
CAAACAACCT
>site_52
GAAACAACAG
>site_53
CAAACAACAT
>site_54
AAAACAACCC
>site_55
AAAACAACTT
>site_56
CAAACAACTT
>site_57
AGAACAACAG
>site_58
CCAACAACTA
>site_59
CCAACAACTC
>site_60
AAAACAACCA
>site_61
AAAACAACTG
>site_62
TAAACAACTA
>site_63
AAAACAACGA
>site_64
GCAACAACAA
>site_65
TAAACAACAC
>site_66
ATAACAACAC
>site_67
ACAACAACAT
>site_68
CCAACAACAA
>site_69
AAAACAACTC
>site_70
CAAACAACAA
>site_71
ACAACAACAA
>site_72
ACAACAACTG
>site_73
AAAACAACTC
>site_74
CGAACAACAC
>site_75
ACAACAACTA
>site_76
CAAACAACGA
>site_77
ATAACAACAA
>site_78
ACAACAACAC
>site_79
AAAACAACGC
>site_80
CAAACAACTT
>site_81
TAAACAACCA
>site_82
TCAACAACAT
>site_83
ACAACAACAC
>site_84
ACAACAACAT
>site_85
ACAACAACAG
>site_86
AGAACAACTG
>site_87
AGAACAACAT
>site_88
GAAACAACAA
>site_89
ACAACAACAA
>site_90
ACAACAACAA
>site_91
AGAACAACCA
>site_92
ACAACAACGG
>site_93
ACAACAACAA
>site_94
TCAACAACAA
>site_95
ACAACAACGG
>site_96
ACAACAACAA
>site_97
ACAACAACAA
>site_98
ACAACAACAA
>site_99
ACAACAACAA
>site_100
ACAACAACGG
>site_101
ATAACAACAA
>site_102
TAAACAACTA
>site_103
TCAACAACCG
>site_104
TGAACAACAA
>site_105
ACAACAACAA
>site_106
AGAACAACCG
>site_107
GGAATAACCC
>site_108
CCAACAACCG
>site_109
CAAACAACAA
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; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/17/peak-motifs.2026-07-17.073707_2026-07-17.073707_AexKPQ/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m4_rc.png
;
; Host name	rsat
; Job started	2026-07-17.073717
; Job done	2026-07-17.073718
; Seconds	0.14
;	user	0.14
;	system	0.05
;	cuser	1.09
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