; matrix-scan  -v 1 -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/07/23/matrix-scan_2026-07-23.093324_eXvt30.matrix -pseudo 1 -decimals 1 -2str -origin end -offset -200 -bginput -markov 2 -bg_pseudo 0.01 -return limits -return sites -return pval -return rank -lth score 1 -uth pval 1e-3 -i $RSAT/public_html/tmp/www-data/2026/07/23/tmp_sequence_2026-07-23.093324_YPdc25.fasta -seq_format fasta -n score
; Slow counting mode            
; Input files
;	input	$RSAT/public_html/tmp/www-data/2026/07/23/tmp_sequence_2026-07-23.093324_YPdc25.fasta
; Matrix files
;	matrix 1	$RSAT/public_html/tmp/www-data/2026/07/23/matrix-scan_2026-07-23.093324_eXvt30.matrix
; Sequence format      	fasta
; Pseudo counts        	1
; Background model
;	Method        	input
;	Markov order  	2
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.33082
;		c	0.18576
;		g	0.16071
;		t	0.32272
; Thresholds	lower	upper
;	pval  	NA	0.001
;	score 	1    	NA
; Output columns
;	1	seq_id
;	2	ft_type
;	3	ft_name
;	4	strand
;	5	start
;	6	end
;	7	sequence
;	8	weight
#seq_id	ft_type	ft_name	strand	start	end	sequence	weight	Pval	ln_Pval	sig	rank	rank_pm
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	limit	START_END	D	-1501	199	.	0	0	0	0
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1465	-1451	TTCTCCACCAACCAT	4.8	2.9e-04	-8.135	3.533	1	1
AT3G13610|Arabidopsis_thaliana.TAIR10.60|F6'H1	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	43	57	TGACCGAACAACCAC	4.6	3.3e-04	-8.015	3.481	2	2
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	limit	START_END	D	-1448	199	.	0	0	0	0
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-125	-111	TGAGCGAACAACCTA	11.6	1.2e-06	-13.631	5.920	1	1
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-945	-931	NNNNNGATCAAATTA	5.7	1.6e-04	-8.729	3.791	2	2
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-792	-778	TAGGCGTACACATTG	3.4	6.9e-04	-7.285	3.164	3	3
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-567	-553	AGGGGTACTAACTAT	3.3	7.2e-04	-7.233	3.141	4	4
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-785	-771	TACGCCTATAACGTT	3.2	7.7e-04	-7.174	3.116	5	5
GSBRNA2T00023848001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g39690D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-196	-182	AAATCGNNNNNNNNN	3.0	8.7e-04	-7.052	3.063	6	6
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-125	-111	TGAGCGAACAACCTA	11.6	1.2e-06	-13.631	5.920	1	1
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1399	-1385	TAAGTGACGAACGAT	4.8	2.9e-04	-8.135	3.533	2	2
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-800	-786	TAGGCGTACACATTG	3.4	6.9e-04	-7.285	3.164	3	3
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-194	-180	ATCGNNNNNNNNNTT	3.2	7.7e-04	-7.174	3.116	4	4
GSBRNA2T00104708001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g25780D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-196	-182	AAATCGNNNNNNNNN	3.0	8.7e-04	-7.052	3.063	5	5
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-327	-313	CTAGCGAATTACTTT	5.5	1.8e-04	-8.596	3.733	1	1
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-868	-854	CAAGNNNNNNNCGTT	4.9	2.7e-04	-8.206	3.564	2	2
GSBRNA2T00123637001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g38030D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1308	-1294	NNNNNNNNNNNCTTT	3.2	7.7e-04	-7.174	3.116	3	3
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	limit	START_END	D	-1459	199	.	0	0	0	0
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-125	-111	TGAGCGAACAACCTA	11.6	1.2e-06	-13.631	5.920	1	1
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-337	-323	CTAGCGAATTACTTT	5.5	1.8e-04	-8.596	3.733	2	2
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	95	109	ACAGGGATCAAAGCT	4.3	4.0e-04	-7.829	3.400	3	3
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1295	-1281	TAAGNNNNNNNNNNN	2.8	9.7e-04	-6.937	3.013	4	4
GSBRNA2T00137685001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA03g32900D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-483	-469	AATGCGAACACAAAT	2.7	1.0e-03	-6.886	2.991	5	5
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	limit	START_END	D	-1426	199	.	0	0	0	0
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-125	-111	TGAGCGAACAACCTA	11.6	1.2e-06	-13.631	5.920	1	1
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-979	-965	CAGGAGATCAAGTTT	7.9	3.3e-05	-10.334	4.488	2	2
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-337	-323	CTAGCGNNNNNNNNN	5.5	1.8e-04	-8.596	3.733	3	3
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	95	109	ACAGGGATCAAAGCT	4.3	4.0e-04	-7.829	3.400	4	4
A03p040480.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p040480.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-993	-979	TTAGCTTCCAACTCA	3.6	6.1e-04	-7.407	3.217	5	5
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	10	24	TAAGCNNNNNNNTCT	5.1	2.4e-04	-8.336	3.620	1	1
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-644	-630	NNNNNNNNNNACTTT	4.2	4.3e-04	-7.761	3.371	2	2
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-252	-238	CAATAGACCACCGTG	3.8	5.4e-04	-7.520	3.266	3	3
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-891	-877	TAAGNNNNNNNNNNN	2.8	9.7e-04	-6.937	3.013	4	4
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	77	91	CATGGCACCAACCTT	2.8	9.7e-04	-6.937	3.013	5	5
GLYMA_07G124400|Glycine_max.Glycine_max_v2.1.60|GLYMA_07G124400	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-911	-897	CAAGCAACCAAGCAA	2.7	1.0e-03	-6.886	2.991	6	6
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-824	-810	AGTGCGACTTAGGTT	4.0	4.8e-04	-7.640	3.318	1	1
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-446	-432	AGTCCGATCAGCGAT	3.8	5.4e-04	-7.520	3.266	2	2
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-582	-568	ACGGCNNNNNNNNNN	3.6	6.1e-04	-7.407	3.217	3	3
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1327	-1313	NNNNNNNNNNACTTA	3.0	8.7e-04	-7.052	3.063	4	4
gene-Lalb_Chr13g0290931|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr13g0290931	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-439	-425	TCAGCGATCGGACAT	2.7	1.0e-03	-6.886	2.991	5	5
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	limit	START_END	D	-1501	199	.	0	0	0	0
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-558	-544	TTAGCCATTAAACAT	3.5	6.5e-04	-7.343	3.189	1	1
107763182|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107763182	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-79	-65	ATTGCAACCAAAGTA	3.4	6.9e-04	-7.285	3.164	2	2
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	limit	START_END	D	-1501	199	.	0	0	0	0
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-884	-870	TAGGCGACCAACGTT	15.9	2.6e-10	-22.061	9.581	1	1
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-893	-879	ATAGCGACCAACGTT	15.5	2.1e-09	-19.978	8.676	2	2
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-594	-580	TAAGCGACCAACTTT	15.2	8.3e-09	-18.611	8.083	3	3
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-934	-920	ATAGCGACCAACTTT	15.0	1.3e-08	-18.124	7.871	4	4
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1048	-1034	AAAGCGACCAACTTT	14.8	2.2e-08	-17.643	7.662	5	5
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-787	-773	AAAGCGACCAACTTT	14.8	2.2e-08	-17.643	7.662	6	6
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-985	-971	ATGGCGACCAACCTT	14.4	3.7e-08	-17.115	7.433	7	7
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-626	-612	AAGGCGACCAAAGTT	13.0	2.5e-07	-15.191	6.597	8	8
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-976	-962	ATGGCGACCAAGGTT	12.6	4.3e-07	-14.657	6.365	9	9
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-725	-711	AAAGCGACTAACTTT	12.6	4.3e-07	-14.657	6.365	10	10
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-585	-571	AAAGCGACCAAAGTT	12.6	4.3e-07	-14.657	6.365	11	11
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-661	-647	TTGGCGACCAAAGTT	12.4	5.2e-07	-14.467	6.283	12	12
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1039	-1025	CTAGCGACCAAAGTT	12.2	6.5e-07	-14.252	6.190	13	13
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-842	-828	TTTGCGACCAACTTT	12.2	6.5e-07	-14.252	6.190	14	14
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1028	-1014	AAAGCGACCAACTAG	11.5	1.3e-06	-13.533	5.877	15	15
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-617	-603	AAAGCGATTAACTTT	10.8	2.7e-06	-12.815	5.565	16	16
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-670	-656	GTGGAGACCAACTTT	9.6	8.1e-06	-11.727	5.093	17	17
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-778	-764	TTAGAGACCAAAGTT	9.0	1.4e-05	-11.213	4.870	18	18
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-833	-819	TAAGCAACCAAAGTT	7.4	4.8e-05	-9.946	4.320	19	19
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-943	-929	AAAACTACCAAAGTT	3.7	5.7e-04	-7.466	3.243	20	20
107785648|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107785648	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-734	-720	TTTTAGACCAAAGTT	3.5	6.5e-04	-7.343	3.189	21	21
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	limit	START_END	D	-1501	199	.	0	0	0	0
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-909	-895	TTGGCTACCAGCTCT	7.7	3.8e-05	-10.169	4.416	1	1
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-564	-550	AAGGAGATCAACATC	7.2	5.6e-05	-9.786	4.250	2	2
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-652	-638	AAAGAGACCAAAGCA	5.9	1.4e-04	-8.869	3.852	3	3
107796566|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107796566	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-637	-623	AGGTCAACCAAATAT	3.2	7.7e-04	-7.174	3.116	4	4
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	limit	START_END	D	-1501	199	.	0	0	0	0
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-171	-157	ACGGACACTAACTTT	6.6	8.7e-05	-9.354	4.063	1	1
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1410	-1396	TAAGCCAATAAGCTA	3.9	5.1e-04	-7.580	3.292	2	2
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-912	-898	CATTCGACCACCCAC	3.3	7.2e-04	-7.233	3.141	3	3
107787976|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107787976	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-873	-859	TTATCGAAGAAGTTT	2.8	9.7e-04	-6.937	3.013	4	4
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	limit	START_END	D	-773	199	.	0	0	0	0
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-444	-430	TGGTCCACCAACTCT	7.5	4.5e-05	-10.013	4.348	1	1
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-309	-295	CCCGCGATCACCTAC	6.6	8.7e-05	-9.354	4.063	2	2
Prudul26B000915|Prunus_dulcis.ALMONDv2.60|Prudul26B000915	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-739	-725	NNNNNNNNNNACTCT	2.8	9.7e-04	-6.937	3.013	3	3
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	limit	START_END	D	-233	199	.	0	0	0	0
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-189	-175	TGGTCCACCAACTCT	7.5	4.5e-05	-10.013	4.348	1	1
PRUPE_6G006000|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_6G006000	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-53	-39	CCCGCGATCACCTAC	6.6	8.7e-05	-9.354	4.063	2	2
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	limit	START_END	D	-1501	199	.	0	0	0	0
Solyc11g072100.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc11g072100.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-900	-886	TAGGCGATCAAGCAT	10.3	4.2e-06	-12.370	5.372	1	1
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	limit	START_END	D	-1501	199	.	0	0	0	0
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-476	-462	TTGTATACCAACTTA	4.2	4.3e-04	-7.761	3.371	1	1
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	53	67	NNNNNNACCNNNNNN	3.7	5.7e-04	-7.466	3.243	2	2
AT3G12900|Arabidopsis_thaliana.TAIR10.60|AT3G12900	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1019	-1005	NNNNNNNNNNNCTTT	3.2	7.7e-04	-7.174	3.116	3	3
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-959	-945	TTAGCNNNNNNNNNN	4.2	4.3e-04	-7.761	3.371	1	1
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	131	145	ATCGCGACCCCACAT	3.8	5.4e-04	-7.520	3.266	2	2
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-612	-598	TAGGNNNNNNNNNNN	3.2	7.7e-04	-7.174	3.116	3	3
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1446	-1432	TTAGCAACNNNNNNN	3.0	8.7e-04	-7.052	3.063	4	4
GSBRNA2T00000146001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA05g26300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-608	-594	NNNNNNNCCTACTTA	3.0	8.7e-04	-7.052	3.063	5	5
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1090	-1076	ATTGCGACGACCTTA	5.3	2.1e-04	-8.469	3.678	1	1
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-498	-484	TAAACGTCCAACGTC	5.0	2.6e-04	-8.264	3.589	2	2
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1369	-1355	TANNNNNNNAACTAT	4.8	2.9e-04	-8.135	3.533	3	3
GSBRNA2T00020767001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73310D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1415	-1401	TAGGNNNNNNNNNTA	3.3	7.2e-04	-7.233	3.141	4	4
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-912	-898	CGGGACATCAACTAC	5.2	2.3e-04	-8.395	3.646	1	1
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-932	-918	CGTGCGAACNNNNNN	5.1	2.4e-04	-8.336	3.620	2	2
GSBRNA2T00020768001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g73320D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-260	-246	TNNNNNNNNNNCTTT	3.5	6.5e-04	-7.343	3.189	3	3
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-976	-962	TCACCGAACAACTCT	5.3	2.1e-04	-8.469	3.678	1	1
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-799	-785	AGAGCCATCNNNNNN	5.0	2.6e-04	-8.264	3.589	2	2
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1287	-1273	CGAGCGCTCACACTT	4.2	4.3e-04	-7.761	3.371	3	3
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-463	-449	ACGCCGATCTACGTC	3.8	5.4e-04	-7.520	3.266	4	4
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1369	-1355	CGCGNNNNNNNCCTC	3.0	8.7e-04	-7.052	3.063	5	5
GSBRNA2T00026360001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC01g38190D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-559	-545	NNNNNNNNCAGGTTT	2.7	1.0e-03	-6.886	2.991	6	6
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	limit	START_END	D	-1501	199	.	0	0	0	0
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	124	138	TGAGCGAATAGCGAC	5.8	1.5e-04	-8.796	3.820	1	1
A01p052810.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A01p052810.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-260	-246	CTGGATACTAACTAT	4.5	3.5e-04	-7.947	3.452	2	2
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	limit	START_END	D	-1501	199	.	0	0	0	0
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-978	-964	TTAGCTACCNNNNNN	6.4	1.0e-04	-9.214	4.002	1	1
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-885	-871	AAGCCCAACAACGTA	4.2	4.3e-04	-7.761	3.371	2	2
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1351	-1337	NNNGGGAACACCTTG	3.0	8.7e-04	-7.052	3.063	3	3
A03p039990.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A03p039990.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1282	-1268	TTAACGACCAAAATG	3.0	8.7e-04	-7.052	3.063	4	4
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	limit	START_END	D	-1501	199	.	0	0	0	0
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	170	184	ATCGCGACCCCACAT	3.8	5.4e-04	-7.520	3.266	1	1
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-572	-558	TAGGNNNNNNNNNNN	3.2	7.7e-04	-7.174	3.116	2	2
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1160	-1146	TTAGCAACNNNNNNN	3.0	8.7e-04	-7.052	3.063	3	3
A05p046620.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A05p046620.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-568	-554	NNNNNNNCCTACTTA	3.0	8.7e-04	-7.052	3.063	4	4
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	153	167	AAGTCTACCAAACCT	4.8	2.9e-04	-8.135	3.533	1	1
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-907	-893	AAAGATAACACCTTT	4.3	4.0e-04	-7.829	3.400	2	2
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1312	-1298	GAAGAGACCAACAAA	3.8	5.4e-04	-7.520	3.266	3	3
GLYMA_08G169100|Glycine_max.Glycine_max_v2.1.60|GLYMA_08G169100	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-997	-983	ATTGATACCAAATTT	3.4	6.9e-04	-7.285	3.164	4	4
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-421	-407	TAGGNNNNNNNNNNN	3.2	7.7e-04	-7.174	3.116	1	1
gene-Lalb_Chr20g0108651|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0108651	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-444	-430	NNNNNNNNNNACTAT	3.0	8.7e-04	-7.052	3.063	2	2
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1389	-1375	NNNNNNNNNAACTTG	3.2	7.7e-04	-7.174	3.116	1	1
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1357	-1343	NNNNNNNNNNACTTC	3.1	8.1e-04	-7.116	3.090	2	2
gene-Lalb_Chr01g0015881|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr01g0015881	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-564	-550	NNNNNNNNNAAACTT	2.9	9.2e-04	-6.994	3.037	3	3
107821681|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107821681	limit	START_END	D	-1501	199	.	0	0	0	0
Prudul26B035414|Prunus_dulcis.ALMONDv2.60|Prudul26B035414	limit	START_END	D	-1501	199	.	0	0	0	0
Prudul26B035414|Prunus_dulcis.ALMONDv2.60|Prudul26B035414	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1181	-1167	NNNNNNNNNAACTTC	4.2	4.3e-04	-7.761	3.371	1	1
Prudul26B035414|Prunus_dulcis.ALMONDv2.60|Prudul26B035414	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1116	-1102	CTAGCCACCTACTCA	4.2	4.3e-04	-7.761	3.371	2	2
PRUPE_4G138300|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G138300	limit	START_END	D	-1501	199	.	0	0	0	0
PRUPE_4G138300|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G138300	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-882	-868	AGTGCCAACAACCAC	4.1	4.5e-04	-7.706	3.347	1	1
PRUPE_4G138300|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G138300	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-863	-849	TCAGNNNNNNNCTTC	3.7	5.7e-04	-7.466	3.243	2	2
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	limit	START_END	D	-1069	199	.	0	0	0	0
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-471	-457	AGCGTGACCAACGTC	7.9	3.3e-05	-10.334	4.488	1	1
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-557	-543	AGATCGAATAAATTC	4.3	4.0e-04	-7.829	3.400	2	2
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-217	-203	CGAGCCATTAANNNN	3.8	5.4e-04	-7.520	3.266	3	3
AT4G31940|Arabidopsis_thaliana.TAIR10.60|CYP82C4	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-606	-592	GTGGTGACTAACTTG	3.4	6.9e-04	-7.285	3.164	4	4
GSBRNA2T00011262001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g67210D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00011262001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC03g67210D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1235	-1221	TCTGCNNNNNNNTTT	2.9	9.2e-04	-6.994	3.037	1	1
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-858	-844	AAGGCCACCACCATT	7.4	4.8e-05	-9.946	4.320	1	1
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-568	-554	TAAGCCGACAACTTT	6.3	1.1e-04	-9.143	3.971	2	2
GSBRNA2T00021899001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA08g12300D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-758	-744	AAGGCCACTACCACT	3.9	5.1e-04	-7.580	3.292	3	3
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	limit	START_END	D	-1501	199	.	0	0	0	0
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-731	-717	AAGGCCACCACCATT	7.4	4.8e-05	-9.946	4.320	1	1
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-482	-468	TAAGCCGACAACATT	4.1	4.5e-04	-7.706	3.347	2	2
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-631	-617	AAGGCCACTACCACT	3.9	5.1e-04	-7.580	3.292	3	3
A08p025520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A08p025520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1409	-1395	CAAACCACCAGCTTT	3.5	6.5e-04	-7.343	3.189	4	4
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-30	-16	AGCGCCATCTCCGTT	3.6	6.1e-04	-7.407	3.217	1	1
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1219	-1205	AGANNNNNNNNCTTC	3.0	8.7e-04	-7.052	3.063	2	2
GLYMA_04G035600|Glycine_max.Glycine_max_v2.1.60|GLYMA_04G035600	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-41	-27	CGCTCGATCAATTTA	2.7	1.0e-03	-6.886	2.991	3	3
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	limit	START_END	D	-1501	199	.	0	0	0	0
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-258	-244	CACTAGAACAACGCT	4.1	4.5e-04	-7.706	3.347	1	1
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-925	-911	NNNNNNNNNNNCCTT	3.2	7.7e-04	-7.174	3.116	2	2
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-752	-738	TAGGNNNNNNNNNNN	3.2	7.7e-04	-7.174	3.116	3	3
gene-Lalb_Chr23g0266791|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr23g0266791	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-925	-911	AAGGNNNNNNNNNNN	3.0	8.7e-04	-7.052	3.063	4	4
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	limit	START_END	D	-1501	199	.	0	0	0	0
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1351	-1337	ACACCGACTAAGGAT	3.3	7.2e-04	-7.233	3.141	1	1
107782393|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107782393	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-495	-481	CGACCTACCACCTTC	2.8	9.7e-04	-6.937	3.013	2	2
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	limit	START_END	D	-1501	199	.	0	0	0	0
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1323	-1309	AAGACGAACACCGTT	7.0	6.5e-05	-9.637	4.185	1	1
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1398	-1384	TATGCCACCAACACT	5.8	1.5e-04	-8.796	3.820	2	2
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-502	-488	CATTCGACCAAGTAC	4.0	4.8e-04	-7.640	3.318	3	3
107790829|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107790829	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-355	-341	GTAGCGGACAAACAT	3.2	7.7e-04	-7.174	3.116	4	4
Prudul26B028905|Prunus_dulcis.ALMONDv2.60|Prudul26B028905	limit	START_END	D	-832	199	.	0	0	0	0
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	limit	START_END	D	-798	199	.	0	0	0	0
PRUPE_1G387700|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_1G387700	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	162	176	GCGGAGACCAGCTTC	6.4	1.0e-04	-9.214	4.002	1	1
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	limit	START_END	D	-1264	199	.	0	0	0	0
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1190	-1176	ACCTCCACCAACCTC	4.2	4.3e-04	-7.761	3.371	1	1
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-213	-199	AAAGTCATCAACGTG	3.5	6.5e-04	-7.343	3.189	2	2
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-662	-648	TAGGNNNNNNNNNNN	3.2	7.7e-04	-7.174	3.116	3	3
gene:Solyc12g088970.1.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|gene:Solyc12g088970.1.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-778	-764	ACGTCCATCANNNNN	3.0	8.7e-04	-7.052	3.063	4	4
AT1G28680|Arabidopsis_thaliana.TAIR10.60|AT1G28680	limit	START_END	D	-1	199	.	0	0	0	0
AT1G28680|Arabidopsis_thaliana.TAIR10.60|AT1G28680	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	90	104	CCAACGACCAAACTC	3.7	5.7e-04	-7.466	3.243	1	1
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-95	-81	TTTGCGCCCAAAGTT	5.5	1.8e-04	-8.596	3.733	1	1
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	95	109	AACGATAACAACCTC	3.8	5.4e-04	-7.520	3.266	2	2
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	60	74	TCAACGACCAAACAC	3.3	7.2e-04	-7.233	3.141	3	3
GSBRNA2T00056005001|Brassica_napus.AST_PRJEB5043_v1.60|BnaA09g27140D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1414	-1400	NNNNNNNNNNNCTTT	3.2	7.7e-04	-7.174	3.116	4	4
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	limit	START_END	D	-1501	199	.	0	0	0	0
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-90	-76	TTTGCGCCCAAAGTT	5.5	1.8e-04	-8.596	3.733	1	1
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-406	-392	TGAGCGAGAAACTTA	4.1	4.5e-04	-7.706	3.347	2	2
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-345	-331	TAGTCGAACAATATT	3.8	5.4e-04	-7.520	3.266	3	3
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	95	109	AACGATAACAACCTC	3.8	5.4e-04	-7.520	3.266	4	4
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	60	74	TCAACGACCAAACAC	3.3	7.2e-04	-7.233	3.141	5	5
GSBRNA2T00046289001|Brassica_napus.AST_PRJEB5043_v1.60|BnaC05g22050D	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-589	-575	TGAGNNNNNNNNNCT	2.7	1.0e-03	-6.886	2.991	6	6
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	limit	START_END	D	-1501	199	.	0	0	0	0
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-95	-81	TTTGCGCCCAAAGTT	5.5	1.8e-04	-8.596	3.733	1	1
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	95	109	AACGATAACAACCTC	3.8	5.4e-04	-7.520	3.266	2	2
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	60	74	TCAACGACCAAACAC	3.3	7.2e-04	-7.233	3.141	3	3
A09p048520.1_BraROA|Brassica_rapa_ro18.SCU_BraROA_2.3.60|A09p048520.1_BraROA	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1414	-1400	NNNNNNNNNNNCTTT	3.2	7.7e-04	-7.174	3.116	4	4
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	limit	START_END	D	-1501	199	.	0	0	0	0
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-1394	-1380	AAAGCGACAAGAGTT	5.5	1.8e-04	-8.596	3.733	1	1
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-165	-151	NNNNTGACCAAGTTT	5.0	2.6e-04	-8.264	3.589	2	2
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-751	-737	TAGGCCATCACCAAT	4.7	3.1e-04	-8.072	3.506	3	3
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1018	-1004	CGTGCGGCTAACGTC	4.4	3.7e-04	-7.891	3.427	4	4
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1175	-1161	NNNNNNNNCAAGGCT	3.3	7.2e-04	-7.233	3.141	5	5
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1227	-1213	NNNNNNNNNAACTTG	3.2	7.7e-04	-7.174	3.116	6	6
GLYMA_13G232400|Glycine_max.Glycine_max_v2.1.60|GLYMA_13G232400	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-62	-48	NNNNNNNNNNNCTTT	3.2	7.7e-04	-7.174	3.116	7	7
gene-Lalb_Chr20g0121341|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0121341	limit	START_END	D	-1440	199	.	0	0	0	0
gene-Lalb_Chr20g0121341|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0121341	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-1421	-1407	TTGGGGACCAACGTT	9.8	6.8e-06	-11.902	5.169	1	1
gene-Lalb_Chr20g0121341|Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI|gene-Lalb_Chr20g0121341	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	162	176	TTAACGACCNNNNNN	4.9	2.7e-04	-8.206	3.564	2	2
107773785|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107773785	limit	START_END	D	-1501	199	.	0	0	0	0
107773785|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107773785	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-84	-70	TTAGCCACCTACCAT	5.9	1.4e-04	-8.869	3.852	1	1
107773785|Nicotiana_tabacum_GCF_000715075.1_ASM71507v2|LOC107773785	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-564	-550	AGAGACAACAACTTA	5.7	1.6e-04	-8.729	3.791	2	2
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	limit	START_END	D	-1123	199	.	0	0	0	0
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	site	oligos_6-8nt_m7oligos_6-8nt_m7	R	-481	-467	CAAGCGACGAGNNNN	4.2	4.3e-04	-7.761	3.371	1	1
Prudul26B009025|Prunus_dulcis.ALMONDv2.60|Prudul26B009025	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	23	37	TAAGTGACCAAAAAT	3.4	6.9e-04	-7.285	3.164	2	2
PRUPE_4G057600|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G057600	limit	START_END	D	-345	199	.	0	0	0	0
PRUPE_4G057600|Prunus_persica.Prunus_persica_NCBIv2.60|PRUPE_4G057600	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	22	36	TAAGTGACCAAAAAT	3.4	6.9e-04	-7.285	3.164	1	1
Solyc04g079720.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc04g079720.ITAG4.0	limit	START_END	D	-1501	199	.	0	0	0	0
Solyc04g079720.ITAG4.0|Solanum_lycopersicum.ITAG4.0.JGI|Solyc04g079720.ITAG4.0	site	oligos_6-8nt_m7oligos_6-8nt_m7	D	-48	-34	NNNNNTATCAACGAC	3.0	8.7e-04	-7.052	3.063	1	1
;
; Matrices
;	matrix	name                          	ncol	nrow	pseudo	Wmin	Wmax	Wrange
;	1	oligos_6-8nt_m7oligos_6-8nt_m7	15	4	1	-41.300	15.900	57.200	a:0.331 c:0.186 g:0.161 t:0.323 
; Number of sequences scanned	50
; Sum of sequence lengths	77748
; N residues           	13976
; Matches per matrix
;	matrix	name                          	matches	scored
;	1	oligos_6-8nt_m7oligos_6-8nt_m7	178	154096
;		TOTAL          	178	154096
; Host name	rsat
; Job started	2026-07-23.093324
; Job done	2026-07-23.093340
; Seconds	15.39
;	user	15.39
;	system	0.05
;	cuser	0.1
;	csystem	0.03