peak-motifs Direct_PEAKS

Motif discovery

Motif 1 oligos_6nt_mkv3_m1

k-mer sig=48.01; evalue=9.8e-49

ssrgggtGGGGCCCCacccyss

SSRGGGTGGGGCCCCACCCYSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssrgggtGGGGCCCCacccyss

PATZ1 MA1961.2 D 11 0.5000 0.846 0.423 NA NA

KLF5 MA0599.1 R 10 0.4545 0.888 0.404 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 148 (13.11%)
Max nb of predicted sites per peak: 44
(Interval_8682)
Mean nb of predicted sites per peak: 6.05

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv3_m2

k-mer sig=19.42; evalue=3.8e-20

aaAAACAAAgcaa

TTGCTTTGTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAACAAAgcaa

Foxj3 MA0851.2 D 9 0.6923 0.857 0.593 NA NA

Sox6 MA0515.1 R 10 0.7692 0.770 0.593 NA NA

SOX4 MA0867.3 D 8 0.6154 0.898 0.553 NA NA

Total matches= 38 (35 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 303 (26.84%)
Max nb of predicted sites per peak: 19
(Interval_9354)
Mean nb of predicted sites per peak: 2.38

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv3_m3

k-mer sig=48.01; evalue=9.8e-49

csaGaGGCCCCAcccyss

SSRGGGTGGGGCCTCTSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csaGaGGCCCCAcccyss

PATZ1 MA1961.2 R 11 0.6111 0.852 0.521 NA NA

KLF5 MA0599.1 D 10 0.5556 0.910 0.506 NA NA

ZNF148 MA1653.2 D 10 0.5556 0.837 0.465 NA NA

Total matches= 18 (15 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 241 (21.35%)
Max nb of predicted sites per peak: 22
(Interval_13)
Mean nb of predicted sites per peak: 2.36

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv3_m4

k-mer sig=48.01; evalue=9.8e-49

ssgbgggGCGGGGCCCCrcccbss

SSVGGGYGGGGCCCCGCCCCVCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgbgggGCGGGGCCCCrcccbss

PATZ1 MA1961.2 D 11 0.4583 0.898 0.412 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 158 (13.99%)
Max nb of predicted sites per peak: 99
(Interval_13)
Mean nb of predicted sites per peak: 12.14

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv3_m5

k-mer sig=14.07; evalue=8.5e-15

ssgCGCCGCss

SSGCGGCGCSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgCGCCGCss

ZBED4 MA2328.1 D 9 0.7500 0.814 0.610 NA NA

ZNF610 MA1713.2 D 9 0.7500 0.771 0.578 NA NA

KLF7 MA1959.2 R 8 0.7273 0.728 0.529 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 125 (11.07%)
Max nb of predicted sites per peak: 36
(Interval_13)
Mean nb of predicted sites per peak: 5.69

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt_m1

k-mer sig=300; evalue=1e-300

ssckGGGcCTGGGGCCCCtggsss

SSSCCAGGGGCCCCAGGCCCMGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGcCTGGGGCCCCtggsss

ZNF454 MA1712.2 R 16 0.6400 0.793 0.508 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 190 (16.83%)
Max nb of predicted sites per peak: 51
(Interval_5818)
Mean nb of predicted sites per peak: 4.72

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 positions_6nt_m2

k-mer sig=300; evalue=1e-300

cssgGaGGCCCCTGGgGCCtCcks

SMGGAGGCCCCAGGGGCCTCCSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGgGCCtCcks

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 158 (13.99%)
Max nb of predicted sites per peak: 45
(Interval_5818)
Mean nb of predicted sites per peak: 4.91

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 positions_6nt_m3

k-mer sig=300; evalue=1e-300

sscctGGGGCCCCckggcccmsss

SSSKGGGCCMGGGGGCCCCAGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscctGGGGCCCCckggcccmsss

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 184 (16.30%)
Max nb of predicted sites per peak: 81
(Interval_5818)
Mean nb of predicted sites per peak: 8.72

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 positions_6nt_m4

k-mer sig=300; evalue=1e-300

svsmGAGgCCCCaGGggCCCmssg

CSSKGGGCCCCTGGGGCCTCKSBS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor svsmGAGgCCCCaGGggCCCmssg

ZNF320 MA1976.2 R 20 0.8333 0.723 0.603 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.710 0.414 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 150 (13.29%)
Max nb of predicted sites per peak: 51
(Interval_5818)
Mean nb of predicted sites per peak: 5.07

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 positions_6nt_m5

k-mer sig=300; evalue=1e-300

cscaGgGGCCCCaGgGCCTCcsss

SSSGGAGGCCCTGGGGCCCCTGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscaGgGGCCCCaGgGCCTCcsss

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 141 (12.49%)
Max nb of predicted sites per peak: 41
(Interval_13)
Mean nb of predicted sites per peak: 5.42

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv4_m1

k-mer sig=20.37; evalue=4.3e-21

mmaGAGGCCChg

CDGGGCCTCTKK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mmaGAGGCCChg

ZNF692 MA1986.2 D 8 0.6667 0.783 0.522 NA NA

ZNF770 MA2099.1 R 8 0.6667 0.758 0.506 NA NA

Zfx MA0146.3 R 8 0.5714 0.881 0.503 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 326 (28.88%)
Max nb of predicted sites per peak: 11
(Interval_10828)
Mean nb of predicted sites per peak: 1.22

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_7nt_mkv4_m2

k-mer sig=11.59; evalue=2.6e-12

ssCCCCACCCccc

GGGGGGTGGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCCCCACCCccc

PATZ1 MA1961.2 R 11 0.8462 0.915 0.774 NA NA

KLF5 MA0599.1 D 10 0.7692 0.922 0.709 NA NA

KLF16 MA0741.1 D 11 0.8462 0.791 0.669 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 287 (25.42%)
Max nb of predicted sites per peak: 10
(Interval_5890)
Mean nb of predicted sites per peak: 1.79

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_7nt_mkv4_m3

k-mer sig=9.64; evalue=2.3e-10

csCCCCTCCCcs

SGGGGAGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csCCCCTCCCcs

PATZ1 MA1961.2 R 11 0.9167 0.931 0.854 NA NA

ZNF148 MA1653.2 D 10 0.8333 0.974 0.812 NA NA

KLF5 MA0599.1 D 10 0.8333 0.922 0.768 NA NA

Total matches= 33 (30 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 300 (26.57%)
Max nb of predicted sites per peak: 10
(Interval_5890)
Mean nb of predicted sites per peak: 1.61

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_7nt_mkv4_m4

k-mer sig=7.95; evalue=1.1e-08

aaAAAAmAAAAaa

TTTTTTKTTTTTT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor aaAAAAmAAAAaa

Stat2 MA1623.2 D 10 0.7692 0.750 0.577 NA NA

FOXD3 MA0041.3 D 12 0.8000 0.711 0.568 NA NA

ZNF384 MA1125.2 D 8 0.6154 0.910 0.560 NA NA

Total matches= 20 (17 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 287 (25.42%)
Max nb of predicted sites per peak: 35
(Interval_4222)
Mean nb of predicted sites per peak: 4.96

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_7nt_mkv4_m5

k-mer sig=7.67; evalue=2.1e-08

ssCGCCCCGcs

SGCGGGGCGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCGCCCCGcs

ZBED4 MA2328.1 D 10 0.9091 0.904 0.822 NA NA

KLF10 MA1511.2 R 8 0.6667 0.935 0.623 NA NA

SP1 MA0079.5 R 8 0.6667 0.931 0.621 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 146 (12.93%)
Max nb of predicted sites per peak: 22
(Interval_13)
Mean nb of predicted sites per peak: 3.48

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 positions_7nt_m1

k-mer sig=300; evalue=1e-300

cssgGaGGCCCCTGGGGcCtCckb

VMGGAGGCCCCAGGGGCCTCCSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGGGcCtCckb

PLAG1 MA0163.1 R 14 0.5833 0.723 0.422 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 150 (13.29%)
Max nb of predicted sites per peak: 36
(Interval_8682)
Mean nb of predicted sites per peak: 4.40

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 positions_7nt_m2

k-mer sig=300; evalue=1e-300

sscccAGGGGCCCCAggss

SSCCTGGGGCCCCTGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscccAGGGGCCCCAggss

PLAG1 MA0163.1 D 13 0.6500 0.723 0.470 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 242 (21.43%)
Max nb of predicted sites per peak: 15
(Interval_5818)
Mean nb of predicted sites per peak: 2.03

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 positions_7nt_m3

k-mer sig=300; evalue=1e-300

syvgGaGGCCcCcaGgGGCCtCss

SSGAGGCCCCTGGGGGCCTCCBRS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syvgGaGGCCcCcaGgGGCCtCss

PLAG1 MA0163.1 D 14 0.5833 0.774 0.452 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 145 (12.84%)
Max nb of predicted sites per peak: 30
(Interval_5818)
Mean nb of predicted sites per peak: 4.31

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 positions_7nt_m4

k-mer sig=300; evalue=1e-300

cmsaGAGGCCcCTGGGGcCTCcgb

VCGGAGGCCCCAGGGGCCTCTSKG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmsaGAGGCCcCTGGGGcCTCcgb

ZNF320 MA1976.2 R 20 0.8333 0.702 0.585 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 159 (14.08%)
Max nb of predicted sites per peak: 34
(Interval_8682)
Mean nb of predicted sites per peak: 3.70

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 positions_7nt_m5

k-mer sig=300; evalue=1e-300

cssgGaGGCCcCaGGGgCCCmsss

SSSKGGGCCCCTGGGGCCTCCSSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCcCaGGGgCCCmsss

PLAG1 MA0163.1 D 14 0.5833 0.705 0.411 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 154 (13.64%)
Max nb of predicted sites per peak: 68
(Interval_13)
Mean nb of predicted sites per peak: 8.10

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 21 oligos_8nt_mkv5_m1

k-mer sig=10.62; evalue=2.4e-11

cscCCCCACCCccmsc

GSKGGGGGTGGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscCCCCACCCccmsc

PATZ1 MA1961.2 R 11 0.6875 0.925 0.636 NA NA

ZNF281 MA1630.3 R 10 0.6250 0.913 0.571 NA NA

ZNF148 MA1653.2 D 10 0.6250 0.886 0.554 NA NA

Total matches= 26 (23 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 297 (26.31%)
Max nb of predicted sites per peak: 23
(Interval_5890)
Mean nb of predicted sites per peak: 3.46

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 22 oligos_8nt_mkv5_m2

k-mer sig=7.05; evalue=8.9e-08

mcCCACACCChs

SDGGGTGTGGGK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mcCCACACCChs

KLF9 MA1107.3 D 11 0.9167 0.910 0.834 NA NA

KLF16 MA0741.1 D 11 0.9167 0.821 0.753 NA NA

SP3 MA0746.3 D 11 0.9167 0.816 0.748 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 213 (18.87%)
Max nb of predicted sites per peak: 4
(Interval_5890)
Mean nb of predicted sites per peak: 1.16

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 23 oligos_8nt_mkv5_m3

k-mer sig=4.83; evalue=1.5e-05

cscCCCCTCCCCcc

GGGGGGAGGGGGSG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscCCCCTCCCCcc

PATZ1 MA1961.2 R 11 0.7857 0.956 0.751 NA NA

ZNF148 MA1653.2 D 10 0.7143 0.981 0.701 NA NA

ZNF281 MA1630.3 R 10 0.7143 0.951 0.679 NA NA

Total matches= 31 (28 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 280 (24.80%)
Max nb of predicted sites per peak: 17
(Interval_13)
Mean nb of predicted sites per peak: 2.53

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 24 oligos_8nt_mkv5_m4

k-mer sig=3.08; evalue=0.00083

sssCGCCCCGCss

SSGCGGGGCGSSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sssCGCCCCGCss

ZBED4 MA2328.1 D 10 0.7692 0.936 0.720 NA NA

SP1 MA0079.5 R 9 0.6923 0.895 0.620 NA NA

KLF10 MA1511.2 R 9 0.6923 0.891 0.617 NA NA

Total matches= 25 (22 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 164 (14.53%)
Max nb of predicted sites per peak: 39
(Interval_13)
Mean nb of predicted sites per peak: 5.52

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 25 oligos_8nt_mkv5_m5

k-mer sig=2.57; evalue=0.0027

ssCCGGGCCGGss

SSCCGGCCCGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssCCGGGCCGGss

SP2 MA0516.3 D 9 0.6923 0.766 0.530 NA NA

SP1 MA0079.5 D 9 0.6923 0.765 0.530 NA NA

KLF15 MA1513.2 R 8 0.6154 0.834 0.513 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 140 (12.40%)
Max nb of predicted sites per peak: 41
(Interval_13)
Mean nb of predicted sites per peak: 7.04

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 26 positions_8nt_m1

k-mer sig=300; evalue=1e-300

ssmgGAGGCCcCTGGGgcCCagsg

CSCTGGGCCCCAGGGGCCTCCKSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmgGAGGCCcCTGGGgcCCagsg

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 153 (13.55%)
Max nb of predicted sites per peak: 55
(Interval_5818)
Mean nb of predicted sites per peak: 5.58

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 27 positions_8nt_m2

k-mer sig=300; evalue=1e-300

ssckGGGCCCCAggggcccmgsss

SSSCKGGGCCCCTGGGGCCCMGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGCCCCAggggcccmgsss

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 163 (14.44%)
Max nb of predicted sites per peak: 71
(Interval_5818)
Mean nb of predicted sites per peak: 8.53

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 28 positions_8nt_m3

k-mer sig=300; evalue=1e-300

sscrGGGCCCCAggggcccagsss

SSSCTGGGCCCCTGGGGCCCYGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscrGGGCCCCAggggcccagsss

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 172 (15.23%)
Max nb of predicted sites per peak: 68
(Interval_13)
Mean nb of predicted sites per peak: 7.45

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 29 positions_8nt_m4

k-mer sig=64.22; evalue=6e-65

yccCTGGGCCCCCagcs

SGCTGGGGGCCCAGGGR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor yccCTGGGCCCCCagcs

PLAG1 MA0163.1 R 12 0.6316 0.771 0.487 NA NA

PLAGL2 MA1548.2 D 8 0.4706 0.985 0.464 NA NA

ZNF692 MA1986.2 R 8 0.4706 0.930 0.438 NA NA

Total matches= 7 (4 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 232 (20.55%)
Max nb of predicted sites per peak: 17
(Interval_8682)
Mean nb of predicted sites per peak: 2.14

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 30 positions_8nt_m5

k-mer sig=300; evalue=1e-300

ssccctGGGGCCCCaggggccccs

SGGGGCCCCTGGGGCCCCAGGGSS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccctGGGGCCCCaggggccccs

PLAG1 MA0163.1 D 14 0.5833 0.762 0.444 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 192 (17.01%)
Max nb of predicted sites per peak: 61
(Interval_5818)
Mean nb of predicted sites per peak: 6.18

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus JASPAR2024_CORE_vertebrates_non-redundant database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: Direct_PEAKS_Homer+Icis (23/07/2026 18:20)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssrgggtGGGGCCCCacccyss

PATZ1 MA1961.2 D 11 0.5000 0.846 0.423 NA NA

KLF5 MA0599.1 R 10 0.4545 0.888 0.404 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgbgggGCGGGGCCCCrcccbss

PATZ1 MA1961.2 D 11 0.4583 0.898 0.412 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGcCTGGGGCCCCtggsss

ZNF454 MA1712.2 R 16 0.6400 0.793 0.508 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGgGCCtCcks

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscctGGGGCCCCckggcccmsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor svsmGAGgCCCCaGGggCCCmssg

ZNF320 MA1976.2 R 20 0.8333 0.723 0.603 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.710 0.414 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscaGgGGCCCCaGgGCCTCcsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGGGcCtCckb

PLAG1 MA0163.1 R 14 0.5833 0.723 0.422 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscccAGGGGCCCCAggss

PLAG1 MA0163.1 D 13 0.6500 0.723 0.470 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syvgGaGGCCcCcaGgGGCCtCss

PLAG1 MA0163.1 D 14 0.5833 0.774 0.452 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmsaGAGGCCcCTGGGGcCTCcgb

ZNF320 MA1976.2 R 20 0.8333 0.702 0.585 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCcCaGGGgCCCmsss

PLAG1 MA0163.1 D 14 0.5833 0.705 0.411 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmgGAGGCCcCTGGGgcCCagsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGCCCCAggggcccmgsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscrGGGCCCCAggggcccagsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccctGGGGCCCCaggggccccs

PLAG1 MA0163.1 D 14 0.5833 0.762 0.444 NA NA

Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: Direct_PEAKS_Homer+Icis (23/07/2026 18:20)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssrgggtGGGGCCCCacccyss PATZ1 MA1961.2 D 11 0.5000 0.846 0.423 NA NA KLF5 MA0599.1 R 10 0.4545 0.888 0.404 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssgbgggGCGGGGCCCCrcccbss PATZ1 MA1961.2 D 11 0.4583 0.898 0.412 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssckGGGcCTGGGGCCCCtggsss ZNF454 MA1712.2 R 16 0.6400 0.793 0.508 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssgGaGGCCCCTGGgGCCtCcks PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sscctGGGGCCCCckggcccmsss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor svsmGAGgCCCCaGGggCCCmssg ZNF320 MA1976.2 R 20 0.8333 0.723 0.603 NA NA PLAG1 MA0163.1 D 14 0.5833 0.710 0.414 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cscaGgGGCCCCaGgGCCTCcsss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssgGaGGCCCCTGGGGcCtCckb PLAG1 MA0163.1 R 14 0.5833 0.723 0.422 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sscccAGGGGCCCCAggss PLAG1 MA0163.1 D 13 0.6500 0.723 0.470 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor syvgGaGGCCcCcaGgGGCCtCss PLAG1 MA0163.1 D 14 0.5833 0.774 0.452 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cmsaGAGGCCcCTGGGGcCTCcgb ZNF320 MA1976.2 R 20 0.8333 0.702 0.585 NA NA PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cssgGaGGCCcCaGGGgCCCmsss PLAG1 MA0163.1 D 14 0.5833 0.705 0.411 NA NA Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssmgGAGGCCcCTGGGgcCCagsg Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssckGGGCCCCAggggcccmgsss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor sscrGGGCCCCAggggcccagsss Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ssccctGGGGCCCCaggggccccs PLAG1 MA0163.1 D 14 0.5833 0.762 0.444 NA NA Total matches= 1

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssrgggtGGGGCCCCacccyss

PATZ1 MA1961.2 D 11 0.5000 0.846 0.423 NA NA

KLF5 MA0599.1 R 10 0.4545 0.888 0.404 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssgbgggGCGGGGCCCCrcccbss

PATZ1 MA1961.2 D 11 0.4583 0.898 0.412 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGcCTGGGGCCCCtggsss

ZNF454 MA1712.2 R 16 0.6400 0.793 0.508 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGgGCCtCcks

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscctGGGGCCCCckggcccmsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor svsmGAGgCCCCaGGggCCCmssg

ZNF320 MA1976.2 R 20 0.8333 0.723 0.603 NA NA

PLAG1 MA0163.1 D 14 0.5833 0.710 0.414 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cscaGgGGCCCCaGgGCCTCcsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCCCTGGGGcCtCckb

PLAG1 MA0163.1 R 14 0.5833 0.723 0.422 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscccAGGGGCCCCAggss

PLAG1 MA0163.1 D 13 0.6500 0.723 0.470 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syvgGaGGCCcCcaGgGGCCtCss

PLAG1 MA0163.1 D 14 0.5833 0.774 0.452 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cmsaGAGGCCcCTGGGGcCTCcgb

ZNF320 MA1976.2 R 20 0.8333 0.702 0.585 NA NA

PLAG1 MA0163.1 R 14 0.5833 0.725 0.423 NA NA

Total matches= 2

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cssgGaGGCCcCaGGGgCCCmsss

PLAG1 MA0163.1 D 14 0.5833 0.705 0.411 NA NA

Total matches= 1

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssmgGAGGCCcCTGGGgcCCagsg

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssckGGGCCCCAggggcccmgsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor sscrGGGCCCCAggggcccagsss

Total matches= 0

JASPAR2024_CORE_vertebrates_non-redundant

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ssccctGGGGCCCCaggggccccs

PLAG1 MA0163.1 D 14 0.5833 0.762 0.444 NA NA

Total matches= 1