; matrix-scan -v 1 -quick -matrix_format transfac -m $RSAT/public_html/tmp/www-data/2026/07/27/matrix-scan_2026-07-27.113612_rpq5Vi.matrix -pseudo 1 -decimals 1 -2str -origin end -bginput -markov 1 -bg_pseudo 0.01 -return limits -return sites -lth score 1e-03 -i $RSAT/public_html/tmp/www-data/2026/07/27/tmp_sequence_2026-07-27.113612_0piA4O.fasta -seq_format fasta -n score ; Quick counting mode ; Input files ; input $RSAT/public_html/tmp/www-data/2026/07/27/tmp_sequence_2026-07-27.113612_0piA4O.fasta ; Matrix files ; matrix 1 $RSAT/public_html/tmp/www-data/2026/07/27/matrix-scan_2026-07-27.113612_rpq5Vi.matrix ; Sequence format fasta ; Pseudo counts 1 ; Background model ; Method input ; Markov order 1 ; Strand undef ; Background pseudo-frequency 0.01 ; Residue probabilities ; a 0.33310 ; c 0.18237 ; g 0.16015 ; t 0.32438 ; Thresholds lower upper ; score 0.001 NA ; Output columns ; 1 seq_id ; 2 ft_type ; 3 ft_name ; 4 strand ; 5 start ; 6 end ; 7 sequence ; 8 weight #seq_id ft_type ft_name strand start end sequence weight F6'H1 limit START_END D -1701 -1 . 0 AT3G12900 limit START_END D -1701 -1 . 0 CYP82C4 limit START_END D -1269 -1 . 0 AT1G28680 limit START_END D -201 -1 . 0 ABCG37 limit START_END D -1701 -1 . 0 COS1 limit START_END D -251 -1 . 0 RIBA1 limit START_END D -1307 -1 . 0 RIBC limit START_END D -278 -1 . 0 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1696 -1685 TGGCCAGCAATA 0.2 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1685 -1674 AACCATGCCTAG 8.8 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1673 -1662 TCTCACGCTTCT 1.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1656 -1645 AACCATGCCTAG 8.8 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1607 -1596 AAACATGTAGAT 0.1 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1596 -1585 ACTCATACATCA 0.0 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1486 -1475 GTTCAATCCAAA 1.9 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1472 -1461 TAACCTACCAAA 2.1 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1447 -1436 TAAAATGCCAAA 3.0 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1429 -1418 GGTCATGACTCA 2.4 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1427 -1416 AGTCATGACCTT 3.9 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1422 -1411 TGACCTTCCTTA 1.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1365 -1354 AATACTGCCCGC 1.0 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1303 -1292 ACATATTCCCGT 0.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1288 -1277 ATGCATTCAACA 0.2 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1230 -1219 GTAAATGCCATT 3.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1212 -1201 ATTGATTCCAAT 0.4 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1186 -1175 GTTCATGTCTAA 3.1 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -730 -719 AAATATTCCCGA 0.4 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -707 -696 GTGCATGCAAGT 5.3 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -705 -694 TTGCATGCACTA 4.2 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -644 -633 TCACATTCCTGT 3.7 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -578 -567 ATTCATAACAAA 0.1 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -499 -488 TCCCAATCCCAT 0.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -485 -474 ACTTATGCAAAT 2.1 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -254 -243 TTGAAAGCCAAT 1.2 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -204 -193 CTTCCCGCGTTT 0.5 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -178 -167 CACCATGCTTAT 1.6 F6'H1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -22 -11 TTTTATTCCAAT 1.7 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1677 -1666 ATTCTTACCCTT 0.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1547 -1536 TAACAAGCCTAA 5.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1537 -1526 TTGCATGCAATA 5.1 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1535 -1524 TTGCATGCAACT 4.5 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1450 -1439 AGACAAGACATC 0.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1445 -1434 AGACATCCCCTC 2.0 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1378 -1367 AGATATACCTCA 0.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1335 -1324 AAACATACAATT 1.5 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1194 -1183 ATGTATGCGTTG 2.2 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1192 -1181 ACGCATACATTA 1.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1124 -1113 ATGCATGTCCCC 1.4 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1122 -1111 GGACATGCATTC 3.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1118 -1107 ATGCATTCGCTT 1.7 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1050 -1039 CATTATTCCGAG 0.2 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1028 -1017 TGAGATGCCTGT 3.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1014 -1003 GAGCCCACCAAA 0.6 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -988 -977 GCTCACGACGTA 2.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -964 -953 TATTAGGCCCAT 1.1 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -938 -927 GCCCAAGCCCCA 3.5 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -933 -922 AGCCCCACCAAG 1.1 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -925 -914 GTCAACGCCTTG 1.4 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -882 -871 AGCCATGCCCCT 7.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -880 -869 GGGCATGGCTCA 2.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -864 -853 AGCCAAGCGTTA 3.2 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -842 -831 ATCCACGCTTAA 1.9 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -799 -788 TAAGAAGCCAAA 0.6 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -775 -764 TAACATTCTAGT 0.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -763 -752 ATGAAAGCCATT 1.7 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -676 -665 TTGTATACCAAC 0.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -640 -629 AGCCATTCCCAA 3.7 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -621 -610 CGTCTCGCCATT 2.6 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -614 -603 GTGCATGCGTCT 4.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -612 -601 ACGCATGCACCA 3.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -517 -506 TTTTATACCCAG 1.0 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -351 -340 ATACATAACGTA 0.4 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -320 -309 AATCTTGGCATT 0.1 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -317 -306 CATAATGCCAAG 2.6 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -310 -299 AAGCGTGCATAA 0.7 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -308 -297 ATGCACGCTTGT 2.9 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -306 -295 TCACAAGCGTGC 1.2 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -244 -233 TTACATTCAAAA 0.2 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -225 -214 TTACGTACCTGA 0.1 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -111 -100 TTTCAAGCAGAA 2.3 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 D -70 -59 GACCAAACCACA 0.8 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -31 -20 TTTCACGCCGTT 8.6 AT3G12900 site oligos_6-8nt_m2oligos_6-8nt_m2 R -22 -11 TATCATTCCTTT 5.4 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1261 -1250 ATGGAAGCCCAT 0.8 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1226 -1215 TTTAAAGCCCAA 0.3 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1168 -1157 GACCATGCATGA 3.9 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1166 -1155 ATTCATGCATGG 5.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1157 -1146 AATCATGAATGT 0.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1078 -1067 AGCCCATCCGAG 0.0 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1073 -1062 TGTCTAGCCCAT 2.0 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1055 -1044 ACCCCGGCCGAA 1.5 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1000 -989 ATGCATACAATA 1.9 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -919 -908 ATTCATGCGGTA 6.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -906 -895 GTTTACTCCAAG 0.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -897 -886 AAGCACGCAGGA 4.4 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -895 -884 AATCCTGCGTGC 2.9 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -879 -868 ATCCAATCCGGC 1.8 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -873 -862 AACTAAGCCGGA 3.1 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -835 -824 GTACATGCAAGT 5.1 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -833 -822 AAACTTGCATGT 0.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -783 -772 GTCCAAGGCAGG 0.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -780 -769 GGACCTGCCTTG 5.4 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -665 -654 GGTCACGCTATG 3.5 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -662 -651 GTGCATAGCGTG 0.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -630 -619 GTTAATGCCTTA 3.8 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -617 -606 AATCACTCGAAT 1.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -603 -592 TTACACGCAATG 3.7 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -561 -550 GCTTATGCATGG 1.1 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -559 -548 ATCCATGCATAA 4.3 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -550 -539 GATCTTGCAAGA 0.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -436 -425 ATTTATGCATTG 1.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -420 -409 GCTCGAGCCATT 2.3 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -346 -335 ATGCATGCACGA 4.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -344 -333 GTGCATGCATTA 4.5 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -293 -282 ACACCTACCGAT 2.6 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -287 -276 AGACATACACCT 0.2 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -278 -267 TCTCATGCGTTC 4.4 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -205 -194 AATCATTCAAAC 0.8 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -121 -110 TTCCAATCCTTG 1.1 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -56 -45 GCTCCTGCACCA 0.3 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 R -42 -31 GGCCATGCACCA 2.7 CYP82C4 site oligos_6-8nt_m2oligos_6-8nt_m2 D -40 -29 GTGCATGGCCCA 1.5 AT1G28680 site oligos_6-8nt_m2oligos_6-8nt_m2 D -194 -183 ACCCATACCATT 5.1 AT1G28680 site oligos_6-8nt_m2oligos_6-8nt_m2 R -174 -163 CGCCATACCTTA 3.3 AT1G28680 site oligos_6-8nt_m2oligos_6-8nt_m2 D -172 -161 AGGTATGGCGAC 0.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1678 -1667 ATGTTTGCCTAT 0.8 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1523 -1512 TTTCAAGTCATT 1.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1518 -1507 AGTCATTCTAAG 0.8 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1496 -1485 TGATATTCCTTA 0.6 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1489 -1478 ATGCATGTGATA 0.8 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1487 -1476 TCACATGCATGA 3.2 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1485 -1474 CTTCATGCATGT 3.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1483 -1472 ATGCATGAAGTT 0.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1335 -1324 ATCCAGGCCTAA 3.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1333 -1322 TGTTAGGCCTGG 1.2 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1318 -1307 CTGCCCGCCGCG 3.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1303 -1292 TCTCATGTAAGT 0.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1268 -1257 AGAAATGCAATT 0.0 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1166 -1155 AATCAAGACATT 2.0 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1062 -1051 AGGCCTCCCTCA 0.1 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1058 -1047 ACACAGGCCTCC 1.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1051 -1040 CAGCATGACACA 0.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1049 -1038 TGTCATGCTGAT 4.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -867 -856 TCTCATACCAAT 5.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -852 -841 TTACATGTAATT 0.0 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -786 -775 ATGCATTCATCT 0.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -732 -721 AAACATGACGAT 3.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -709 -698 TTTCATTCGTCA 0.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -632 -621 AAACCCACCAAT 0.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -623 -612 TTTCATGCTGCG 3.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -569 -558 GTATATACCTGA 0.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -529 -518 AAACATACATAA 0.7 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -494 -483 CATCAAGCAAAC 0.2 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -480 -469 GGTCATGTCTTC 2.6 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -478 -467 AGACATGACCTA 2.9 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -326 -315 ACACATGCTATC 2.7 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -324 -313 TAGCATGTGTTA 0.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -300 -289 TATCATACAATG 2.1 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -190 -179 ATATACGCAAGT 1.1 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -188 -177 TGACTTGCGTAT 1.1 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -186 -175 ACGCAAGTCAAA 0.8 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -116 -105 CTTTAAGCCAAG 1.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -111 -100 AGCCAAGCCATG 6.6 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 R -108 -97 AGCCATGGCTTG 3.4 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -106 -95 AGCCATGGCTCA 2.3 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -57 -46 GAGCTTGCAGAG 0.5 ABCG37 site oligos_6-8nt_m2oligos_6-8nt_m2 D -26 -15 CATCATTCCGGA 3.6 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -93 -82 AGACACGGCGGC 2.4 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -85 -74 GTCTCCGCCTGA 0.0 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -83 -72 TATCAGGCGGAG 2.2 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -67 -56 CGGCACACCGTC 1.9 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -49 -38 ATTGACGCGAAT 0.6 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -35 -24 TCCTCCGCCTGT 0.3 COS1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -33 -22 TAACAGGCGGAG 1.3 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1246 -1235 ATACCCACCCGA 0.3 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1107 -1096 ATTCATGTCATG 4.0 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -1104 -1093 TTTCATGACATG 3.7 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1102 -1091 TGTCATGAAAAT 0.2 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -1041 -1030 GATCATGGAAGT 0.5 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -907 -896 ATATATGCGTCG 1.5 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -777 -766 ACCCATGCAACA 3.5 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -721 -710 TGACATACCAAC 4.1 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -714 -703 TGTCACGGGAAT 0.0 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -710 -699 GCCCATTCCCGT 3.7 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -703 -692 TGGGCTGCCACT 0.9 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -653 -642 TAACAATCCTTG 1.6 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -634 -623 GACCATCCGAGA 0.0 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -603 -592 CTTCATACCATA 3.9 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -591 -580 TAATATGCTAAG 0.4 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -520 -509 GACTATGCTAAT 0.4 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -514 -503 TCTCATGACTAT 3.5 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -512 -501 AGTCATGAGATC 0.5 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -469 -458 AAATATGTCGTA 0.1 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -464 -453 TCACATACGACA 0.2 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -308 -297 CGTCAAGGCAGA 0.0 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -305 -294 GTCTCTGCCTTG 1.2 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 R -113 -102 ACTTACACCAAA 0.1 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -39 -28 AGCCAAGCAAGT 3.2 RIBA1 site oligos_6-8nt_m2oligos_6-8nt_m2 D -17 -6 CTCCACACCGAA 1.2 RIBC site oligos_6-8nt_m2oligos_6-8nt_m2 D -263 -252 ATTTATTCCAAT 2.2 RIBC site oligos_6-8nt_m2oligos_6-8nt_m2 R -159 -148 GTACGAGCCGCC 0.6 RIBC site oligos_6-8nt_m2oligos_6-8nt_m2 D -39 -28 TCTCAAGACATC 0.1 ; ; Matrices ; matrix name ncol nrow pseudo Wmin Wmax Wrange ; 1 oligos_6-8nt_m2oligos_6-8nt_m2 12 4 0 -26.400 10.600 37.000 a:0.333 c:0.182 g:0.160 t:0.324 ; Number of sequences scanned 8 ; Sum of sequence lengths 8409 ; N residues 653 ; Matches per matrix ; matrix name matches scored ; 1 oligos_6-8nt_m2oligos_6-8nt_m2 194 0 ; TOTAL 194 0 ; Host name rsat ; Job started 2026-07-27.113612 ; Job done 2026-07-27.113612 ; Seconds 0.15 ; user 0.15 ; system 0.02 ; cuser 0.11 ; csystem 0.02