; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	12	9	60	0	0	3	0	59	8	11
c	21	15	0	60	3	1	51	0	21	18
g	11	21	0	0	56	38	2	1	15	20
t	16	15	0	0	1	18	7	0	16	11
//
; Sites	60
>site_0
CTACGGCAAC
>site_1
TCACGGGACG
>site_2
GGACGGCAAC
>site_3
CGACTGCATA
>site_4
TGACGTCATG
>site_5
TGACGTCAGT
>site_6
ACACGGTATT
>site_7
ACACGGTATT
>site_8
ACACGGTATT
>site_9
TCACGGTACC
>site_10
TGACGTCATC
>site_11
TAACGGCACT
>site_12
AGACGGCAGT
>site_13
ATACGGCGCG
>site_14
CCACGGCAAA
>site_15
CTACGTCATC
>site_16
TAACGACAGT
>site_17
ATACGTCAGC
>site_18
GTACGGCACG
>site_19
TGACGTCACC
>site_20
TGACGTCATA
>site_21
CTACGGGACG
>site_22
AGACGGCAGC
>site_23
CTACGGCAGA
>site_24
ACACGTCATG
>site_25
TTACGGTACA
>site_26
GCACGGTAGT
>site_27
TAACGTCACA
>site_28
GTACCGCAGA
>site_29
AAACGGCATT
>site_30
TAACGGCAAG
>site_31
CCACGGCACG
>site_32
TAACCGCACG
>site_33
CGACGGCAGG
>site_34
CGACGGCAAC
>site_35
CGACGACACA
>site_36
CAACGGCAGC
>site_37
ACACGGCAGC
>site_38
GCACGGCACT
>site_39
CTACGGCACC
>site_40
ATACGGCATT
>site_41
CTACGTCACG
>site_42
CAACGGCAAG
>site_43
CGACGTCACC
>site_44
CTACGGTAAC
>site_45
CCACCGCATA
>site_46
AGACGTCATC
>site_47
GGACGACATG
>site_48
GGACGGCAGC
>site_49
GCACGGCAGA
>site_50
TGACGTCACG
>site_51
CTACGTCATC
>site_52
GTACGTCACG
>site_53
CGACGGCAGG
>site_54
CCACGGCAAG
>site_55
CCACGCCATA
>site_56
TGACGTCACG
>site_57
TGACGTCACG
>site_58
GGACGTCACG
>site_59
GAACGGCAGC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.110936_2026-07-28.110936_IaTuP0/results/positions_6nt//peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1_rc.png
;
; Host name	rsat
; Job started	2026-07-28.110954
; Job done	2026-07-28.110955
; Seconds	0.15
;	user	0.15
;	system	0.02
;	cuser	0.26
;	csystem	0.05
