; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.153924_2026-07-28.153924_P9lKwt/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.153924_2026-07-28.153924_P9lKwt/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.153924_2026-07-28.153924_P9lKwt/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2026/07/28/peak-motifs.2026-07-28.153924_2026-07-28.153924_P9lKwt/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	3	5	1	1	1	1	1	4	2	6	3	2	1	1	3	1	2	1	1	2	2	1	9	4
c	22	20	11	7	32	15	6	37	6	30	6	6	38	33	35	36	2	37	38	32	36	35	10	16
g	14	10	26	30	7	26	32	1	34	4	29	34	2	6	3	5	39	4	2	6	5	5	15	16
t	4	8	5	5	3	1	4	1	1	3	5	1	2	3	2	1	0	1	2	3	0	2	9	7
//
; Sites	43
>site_0
ACCTCGGAGCGGCCCCGCGACCGC
>site_1
CCGACGGCGAGACCCCGCCCCATC
>site_2
CGCGCCGCACTGCCCCGCCCCGTG
>site_3
AGTGCGGCGCGGCTCCGGTTCCCG
>site_4
CCGGCGGCCGCGCCCCGCCGCCAC
>site_5
GTGGCGGCGGGGCGCGGCCGCCGG
>site_6
GCGGCCGCGCCCCGCCGCCACCAT
>site_7
CAGGCGGCGGAGCCCCAACCCCAC
>site_8
CCCGGGCGGCGGCCCCGCCCCCGC
>site_9
GGGGCGGAGCTCTCCCGCCCCCTC
>site_10
CTGTCGCCGCGGCAACGCGCCCCG
>site_11
TTGTTTGCGAGGCCCCGCCCCGCG
>site_12
GCTGCGGCGCCGCCGCGCACCCCG
>site_13
GTGCCCGAGCGTCCCCGCCGCCCC
>site_14
GCGTCCCCGCCGCCCCGCCGCCCT
>site_15
CGGCGGCCGAGGCCCCGCCTCCGT
>site_16
CCGCGCGCCCGGCCCCGCCCCCTA
>site_17
CAGCGCGCGCGGCCCGGGCCCCGG
>site_18
CGCGCCGCGCGGCCCCGCCCCCGC
>site_19
TCGCCGGTCCTGCCCCGCCCCTAC
>site_20
TAGGCGGCGCGGCGGGGCCCGCGG
>site_21
CCGCCGTCGTTGCCCCGCCCGCCT
>site_22
TCGGGGGCGAGGCCGCGTCGCCGC
>site_23
GCGGCGACGCGGCCTCGCCCCCGA
>site_24
CGGGCCCCGAGGCCCCGCCCCGAG
>site_25
GGCGCGGCTCTACCCCGCCCACTG
>site_26
CCTGCGGCGCGGCTCTACCCCGCC
>site_27
GAGGCCCCGCGGCCTGGCCCCCAA
>site_28
GGGGAGGAGCGGCCCCCCCCCCAG
>site_29
AGCGTCGCACAGCCCCGCCCCCTG
>site_30
CCGCCCGCCCCGCCCCGCCCCTCG
>site_31
GTCGCATCGAGGCCCCGCCCCCTG
>site_32
CTGGGGGCGTGGCCCAGGCCCCCC
>site_33
CTGTCGGCGCGCCGCGGCCCGCAG
>site_34
CCTGCGGCGCGCACACGCCCGCGA
>site_35
GCTGTGGCGCGGGGCCGCCCCCTT
>site_36
CCGGCCGCGGCGCCCCGCTCACGT
>site_37
CACGCGGCCCGGCTCCGCCCCGTC
>site_38
GCGGCGTCGCGGGCCCCGCGCCGG
>site_39
CTCGGCGCGCGCTCCCGCCCCCGC
>site_40
CGCGCCGCGCGCCCCCGCCTGCGC
>site_41
GCCGCGTCCTGGCCCCGCCCCCAT
>site_42
CCAGCCGCGCAGCGACGCCCCCGC
a	5	4	1	1	1	1	0	1	0	0	0	2	1	0	0	1	1	2	0	1	0	1	4	4
c	13	12	8	9	6	5	20	15	3	21	20	18	20	3	20	17	7	20	2	20	18	2	13	10
g	5	6	13	11	15	16	3	6	18	1	3	2	0	17	2	2	15	1	21	1	5	19	3	6
t	0	1	1	2	1	1	0	1	2	1	0	1	2	3	1	3	0	0	0	1	0	1	3	3
//
; Sites	23
>site_0
GCCGCGCGCTCCCGCCGCGCCGCT
>site_1
AGCCGGCGGCCGCGCCCCGCCGCC
>site_2
AGAGGGCGGGCCCGGCGCGCGGTA
>site_3
CCGGGGCTGCCCCGCCCCGCCGGC
>site_4
GCCAGGCAGCCCCGCGGCGCGGCG
>site_5
CCGCGGCCGCCCCGCCCCGTGAGG
>site_6
CCCGAGCGTCCCCGCCGCCCCGCC
>site_7
GAGCGTCCCCGCCGCCCCGCCGCC
>site_8
CAGGTGGGGCCCCGCTGCGCCGAA
>site_9
CCGCGACCGCCGAGCAGCGCCGAA
>site_10
AGCCGCGGGCCCCGCCGCGCCGCC
>site_11
CGGGCGCCGCCCCTCCGAGCCGCG
>site_12
CCGTCGCCGCCCCTCTGCGACGTG
>site_13
CAGCGCGCGCGCCGCCACGCCGGA
>site_14
CACCGCCCGCCCCGCCCCGCCCCT
>site_15
CCGTGGCCGCCTCGGCCCGCCTAC
>site_16
ACGCGCCCTCCCCGCCGCCCCGAC
>site_17
CGCGGGCCGCGCTCCCGGGCCGTT
>site_18
CCGGGGCCGCCCTCCGGAGCCGCC
>site_19
AGCGCCCCGCCCCGCCCCGCGGCC
>site_20
GCGGGGCCGCCCCCTTGCGCCCCG
>site_21
GCTCCGCCCCCACGCCGCGCCGCC
>site_22
CTGGCGCCGCCACTCCGCGGGGCG
a	12	10	2	4	3	1	0	4	5	0	4	1	0	3	1	4	4	5	1	4	5	5	9	7
c	35	32	15	49	14	61	48	52	6	59	55	61	58	6	56	14	56	56	10	55	15	16	28	36
g	17	20	45	11	43	4	16	7	51	6	6	3	6	52	7	46	4	3	50	6	41	37	23	21
t	3	5	5	3	7	1	3	4	5	2	2	2	3	6	3	3	3	3	6	2	6	9	7	3
//
; Sites	67
>site_0
CCTCGCCTGCCCCGCGCCGCTGGA
>site_1
GCGCGCTCCCGCCGCGCCGCTACA
>site_2
CCGGGCCCGCCCCCCACCGCCCGG
>site_3
ACGCCCCGCCCCCTCGCCGCGTTC
>site_4
CGGCTCCCACCCCGCCCCCCGCAG
>site_5
CGGCGGCCGCGCCCCGCCGCCACC
>site_6
GTGGCCCCGCCCCTCCCCGCGGCC
>site_7
TAGCGCCGTCCCCGGGCGGCGGCC
>site_8
GCCCACCTGCCCCGTCCCGCGGGC
>site_9
GCCAGGCAGCCCCGCGGCGCGGCG
>site_10
AGCCCCGCGCCCCTCGCCGCGGCC
>site_11
AATGCCCCGCCCCGCGCAGCCGCC
>site_12
TCGCTCGCGCCGGGCCCCGCGGCC
>site_13
CCGCGGCCGCCCCGCCCCGTGAGG
>site_14
GTCGCCCCGCCCCGCACCGGGGGC
>site_15
GCGTCCCCGCCCCGCGCCACGTGC
>site_16
GTGCCCCCTCCCCGCGTCCCCGCG
>site_17
CCGGCCCCGCCCCGCGCCGGAGGC
>site_18
CGCCGCGCCCCCCGCGCCGCCCGC
>site_19
CCGCGAGCTGCCCGCGCCGCGCCC
>site_20
GCGCGCGCGCCCCGCGAGGGAGGG
>site_21
GCGCGCGCGGCCCGGGCCCCGGCC
>site_22
CCGAGCCCGCCCCGCTCACCTGCG
>site_23
CGGGGCCTGCGTCGCGCTGCGGGC
>site_24
ACGTGCCCGCAGCGCGACGCAGGC
>site_25
CAGCGCGCGCGCCGCCACGCCGGA
>site_26
AAACGCCCGCGCCTAGCCGCGCGT
>site_27
CGGACCCCGCCCCGGGCCGCTCGG
>site_28
CCGCGCCAGCCCCGCCCCGAGAAA
>site_29
CACCGCCCGCCCCGCCCCGCCCCT
>site_30
CACCGCCCGCCCTGCCCCTCGCAG
>site_31
CACCGCCCGCCCCGCCCCTCGTCA
>site_32
CCGCGCGCGCCCGGCGTGGCAGAG
>site_33
GCGCGCCGGTCCCGGGCCGCGGCC
>site_34
GGGCACCCGCACGGCGCAGCCGCG
>site_35
ACGCGCCCTCCCCGCCGCCCCGAC
>site_36
ACGCGCCCCGCCCTCGCCTCGCCC
>site_37
CTGGCCCCGCCCCACGCCGACGTC
>site_38
TCCCGCCCGCCCTGCGTCCCCGGC
>site_39
CCCCGCTCGCCCCGCCCACCGGGC
>site_40
AGCGCCCCGCCCCGCCCCGCGGCC
>site_41
CAGCTCCTGCCCGGCGCCTCGCGC
>site_42
GCGCGCCCATCCCCCACCGCGGCG
>site_43
GCTGGCCCGCCCCGTGCCGCAGAC
>site_44
CGGCGCCAGCACCTGGCCGCGGAC
>site_45
CCCCGCCCGCTCCGCGCTGCCTGA
>site_46
CCGCGCCCCGCCCGCTCCGCGCTG
>site_47
CGCCCCCCGCCCCGGACCGCGCGG
>site_48
CGGCGCGCGCCCCCCGCCCCGGAC
>site_49
GGGCTCCGCCCCCACGCCGCGCCG
>site_50
CCGCCCCCACGCCGCGCCGCCTTC
>site_51
AGGGGCGAGCCCGGCGCCGCGAGG
>site_52
GAGCTCCCGCTCTGCGCCGGGGGC
>site_53
CCCCGCGCGCCCCGCGCCGGGCGG
>site_54
CGGCGTCGACCCCGCCCCGAGGCC
>site_55
CGGCGCGGGGCCCGCGACGCCGCT
>site_56
CGTCGCGGGCCCCGCGCCGGGCAG
>site_57
ACCCGCCCTCCCCGCGCCTCTCTC
>site_58
CCGCGGCCGCACCGCGCCTCTTCC
>site_59
AAGTGCGCGCCCGGCGCCGAGGGC
>site_60
CGGCGCGCGCCACGCTCTGCGTTG
>site_61
GCGCTCGCGCCGCGCGCCCCCGCC
>site_62
AGGGGCCCGGCCCGGGGCGCGTTG
>site_63
CGAAGCCCGCCTCCCGCCGCGTCC
>site_64
CTGCACTCGCCCCATGCCGCGGCC
>site_65
CCTCCCCCGCCCCGCGGAGTGGCG
>site_66
GGGCTCCCACCCCCCGCCCCGGCA
a	2	6	3	2	3	2	2	2	1	1	1	0	0	2	1	2	0	0	1	3	0	1	1	2
c	12	7	9	2	6	3	17	20	3	21	1	22	20	18	22	2	19	19	20	7	6	13	13	12
g	5	10	11	16	14	18	4	0	18	1	21	1	1	3	0	17	2	4	2	9	16	9	7	7
t	4	0	0	3	0	0	0	1	1	0	0	0	2	0	0	2	2	0	0	4	1	0	2	2
//
; Sites	23
>site_0
CGGCGGCCGCGCCCCGCCGCCACC
>site_1
CCGTGGCCCCGCCCCTCCCCGCGG
>site_2
TGAGCGGCGCGCCCCACCCGGGCC
>site_3
CAGACGCCGCGCCCCGTCCCGGCC
>site_4
CGAAGGCAGCGCCGCGCCCGGGGC
>site_5
CCCGCGCCGCGCCCCCCGCGCCGC
>site_6
AGGTGAGCGCGCCGCACCCGGCCG
>site_7
TAGGAGCCCCGCCCCGTCCTCCCG
>site_8
CGCGGAGCGCGGCCCGCCGGGCGC
>site_9
GGCGGGCCGCGCTCCGCGCTGGGT
>site_10
GGCGGGACGCGCCACTCCCGGGCC
>site_11
AGGTGGCCGCACCACGCGCGGCTA
>site_12
GACGGGCCACGCCCCCGCCTGCCC
>site_13
CGGGGGCCGGGCCCCGCGCAGGCT
>site_14
CCCGGGCTTCGCCCCGCCCACCAG
>site_15
TGGGGCACGCGCCCCGCCCTCGCC
>site_16
GCAGCGCCCCGCCCCGCCCCGCGG
>site_17
CACCAGCAGCGCCCCGCCCCGCCC
>site_18
CAGGGCCCGCCCCCAGCCCCGCTC
>site_19
CAGGCGCCGCGCTGCGCCCCGCCA
>site_20
GCCGCGCCGAGCCCCGCCAGCCGG
>site_21
CCGGGCGCGCGCGCCGGCCGGGCG
>site_22
TCCGAGCCGCGCCCCGCCCATGCC
a	6	1	0	2	0	3	1	0	1	2	2	0	1	0	3	3	0	2	1	1	2	0	3	2
c	10	12	23	6	24	21	3	24	23	21	21	4	23	21	10	21	5	21	22	5	7	8	13	9
g	7	9	1	8	2	0	20	1	0	2	0	20	2	4	13	1	20	0	2	20	15	16	5	9
t	3	4	2	10	0	2	2	1	2	1	3	2	0	1	0	1	1	3	1	0	2	2	5	6
//
; Sites	26
>site_0
AGCCCCGCCCCGCCCCCCGGGCGC
>site_1
GTCCCTGCCCTGCCCCGCCGGGGG
>site_2
GACCCCGCCCCGGCCCGCCCGGCC
>site_3
CCCTCCCCCACGCCGGGACGGCCT
>site_4
TCCTCCCCTCCCCCACGCCGGGAC
>site_5
GGGGCTGCCCCGCCCCGCCGGCCG
>site_6
AGCTCCGCCCCCCGCCGCCGGGCT
>site_7
TCCTCAGCACAGCCGTGCCGGTGA
>site_8
CCCGCCGCCGCCCGGAGCCGGGTC
>site_9
GGCGCCGCCCCTCCGAGCCGCGGG
>site_10
GTCGCCGCCCCTCTGCGACGTGAG
>site_11
ACCGCCGTCCTGCGCCGCCGGGCA
>site_12
CGCGCAGCTCTGCCACGCCGGGCG
>site_13
CTCCCCGCCCCGCCGCCTCGGCTC
>site_14
CCCGCCGCCCCGACGCCCCCGCGG
>site_15
CGCTCCGCCCCCGCCCGCCGTCTT
>site_16
CGCCCCGCCCCGCCCCGCGGCCCG
>site_17
AGCAGCGCCCCGCCCCGCCCCGCG
>site_18
CGCTGCGCCCCGCCACCCCGAGCC
>site_19
CCTTCAGCCCCGCCGCGCTCAGTT
>site_20
ACCTCCACCCCGCCGCTTCACGCG
>site_21
TCCGCCCCCACGCCGCGCCGCCTT
>site_22
GCCCCCTCCTCGCGGCGCCGGGCT
>site_23
GCTTCCGCCGCGCCGAGCCCCGCC
>site_24
CTCACCGGCCAGCCGCGCAGCGAC
>site_25
ACCTCCTCCCCGCCCCCTCGGTCC
; Host name	rsat
; Job started	2026-07-28.153943
; Job done	2026-07-28.153943
; Seconds	0.15
;	user	0.15
;	system	0.01
;	cuser	0
;	csystem	0
