; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2026/08/11/oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2026/08/11/oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2026/08/11/oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2026/08/11/oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2026/08/11/oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 4 7 3 0 12 13 2 0 13 4 4
c 5 1 8 13 0 0 11 13 0 3 2
g 4 2 1 0 0 0 0 0 0 2 3
t 0 3 1 0 1 0 0 0 0 4 4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m1_rc.png
;
a 2 0 0 0 0 0 0 0 6 6 1 2
c 3 2 6 0 0 0 1 0 0 0 1 2
g 0 2 0 0 6 0 4 6 0 0 2 0
t 1 2 0 6 0 6 1 0 0 0 2 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m2_rc.png
;
a 0 2 0 0 4 0 0 0 5 0 1
c 0 1 5 0 0 0 0 5 0 0 0
g 3 0 0 0 0 5 4 0 0 2 2
t 2 2 0 5 1 0 1 0 0 3 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2026/08/11//oligo-analysis_2026-08-11.111741_LrZudi_pssm_count_matrices_logo_m3_rc.png
;
; Host name rsat
; Job started 2026-08-11.111747
; Job done 2026-08-11.111748
; Seconds 0.11
; user 0.11
; system 0.03
; cuser 0.74
; csystem 0.16