AC assembly_1 XX ID assembly_1 XX DE waAAAAgTCAAcww P0 a c g t 1 749 304 291 573 2 795 348 307 467 3 1617 119 76 105 4 1682 82 64 89 5 1683 65 61 108 6 1701 51 54 111 7 275 118 1279 245 8 172 58 67 1620 9 279 1341 111 186 10 1724 49 57 87 11 1702 61 43 111 12 417 1201 102 197 13 743 254 309 611 14 768 338 251 560 XX CC program: feature CC matrix.nb: 1 CC matrix.nb: 1 CC sites: 1917 CC consensus.strict: aaAAAAgTCAAcaa CC consensus.strict.rc: TTGTTGACTTTTTT CC consensus.IUPAC: waAAAAgTCAAcww CC consensus.IUPAC.rc: WWGTTGACTTTTTW CC consensus.regexp: [at]aAAAAgTCAAc[at][at] CC consensus.regexp.rc: [AT][AT]GTTGACTTTTT[AT] XX // AC assembly_2 XX ID assembly_2 XX DE waAAAAgTcAAAww P0 a c g t 1 1533 620 556 1156 2 1636 671 620 938 3 3339 177 132 217 4 3404 131 129 201 5 3371 119 129 246 6 3357 96 134 278 7 800 291 2234 540 8 557 182 161 2965 9 747 2412 288 418 10 3406 150 102 207 11 3461 118 100 186 12 3394 172 102 197 13 1676 479 554 1156 14 1510 617 502 1236 XX CC program: feature CC matrix.nb: 2 CC matrix.nb: 2 CC sites: 3865 CC consensus.strict: aaAAAAgTcAAAaa CC consensus.strict.rc: TTTTTGACTTTTTT CC consensus.IUPAC: waAAAAgTcAAAww CC consensus.IUPAC.rc: WWTTTGACTTTTTW CC consensus.regexp: [at]aAAAAgTcAAA[at][at] CC consensus.regexp.rc: [AT][AT]TTTGACTTTTT[AT] XX // AC assembly_3 XX ID assembly_3 XX DE wwAACACGTGTTww P0 a c g t 1 295 157 125 283 2 351 150 137 222 3 732 45 34 49 4 733 40 22 65 5 132 621 44 63 6 766 16 28 50 7 93 637 24 106 8 106 24 637 93 9 50 28 16 766 10 63 44 621 132 11 65 22 40 733 12 49 34 45 732 13 222 137 150 351 14 283 125 157 295 XX CC program: feature CC matrix.nb: 3 CC matrix.nb: 3 CC sites: 860 CC consensus.strict: aaAACACGTGTTtt CC consensus.strict.rc: AAAACACGTGTTTT CC consensus.IUPAC: wwAACACGTGTTww CC consensus.IUPAC.rc: WWAACACGTGTTWW CC consensus.regexp: [at][at]AACACGTGTT[at][at] CC consensus.regexp.rc: [AT][AT]AACACGTGTT[AT][AT] XX // AC assembly_4 XX ID assembly_4 XX DE wwwTGGTCAACww P0 a c g t 1 234 101 113 194 2 212 106 72 252 3 167 65 82 328 4 40 32 38 532 5 68 15 464 95 6 22 5 593 22 7 16 12 9 605 8 22 582 12 26 9 598 23 7 14 10 606 10 9 17 11 83 492 31 36 12 205 113 128 196 13 232 103 99 208 XX CC program: feature CC matrix.nb: 4 CC matrix.nb: 4 CC sites: 642 CC consensus.strict: attTGGTCAACaa CC consensus.strict.rc: TTGTTGACCAAAT CC consensus.IUPAC: wwwTGGTCAACww CC consensus.IUPAC.rc: WWGTTGACCAWWW CC consensus.regexp: [at][at][at]TGGTCAAC[at][at] CC consensus.regexp.rc: [AT][AT]GTTGACCA[AT][AT][AT] XX // AC assembly_5 XX ID assembly_5 XX DE wwAACGCGTTww P0 a c g t 1 127 60 45 110 2 140 56 44 102 3 307 11 9 15 4 332 6 2 2 5 22 303 3 14 6 41 7 275 19 7 19 275 7 41 8 14 3 303 22 9 2 2 6 332 10 15 9 11 307 11 102 44 56 140 12 110 45 60 127 XX CC program: feature CC matrix.nb: 5 CC matrix.nb: 5 CC sites: 342 CC consensus.strict: aaAACGCGTTtt CC consensus.strict.rc: AAAACGCGTTTT CC consensus.IUPAC: wwAACGCGTTww CC consensus.IUPAC.rc: WWAACGCGTTWW CC consensus.regexp: [at][at]AACGCGTT[at][at] CC consensus.regexp.rc: [AT][AT]AACGCGTT[AT][AT] XX // AC assembly_6 XX ID assembly_6 XX DE wwaAAAAAATAATTTgthww P0 a c g t 1 867 249 252 602 2 874 279 244 573 3 822 480 239 429 4 1630 101 78 161 5 1623 113 85 149 6 1657 72 59 182 7 1623 99 64 184 8 1667 69 49 185 9 1671 87 58 154 10 413 92 81 1384 11 1627 78 90 175 12 1624 56 78 212 13 260 86 75 1549 14 280 95 117 1478 15 269 70 136 1495 16 370 159 1016 425 17 376 118 173 1303 18 537 622 250 561 19 706 255 280 729 20 727 262 274 707 XX CC program: feature CC matrix.nb: 6 CC matrix.nb: 6 CC sites: 1970 CC consensus.strict: aaaAAAAAATAATTTgtcta CC consensus.strict.rc: TAGACAAATTATTTTTTTTT CC consensus.IUPAC: wwaAAAAAATAATTTgthww CC consensus.IUPAC.rc: WWDACAAATTATTTTTTTWW CC consensus.regexp: [at][at]aAAAAAATAATTTgt[act][at][at] CC consensus.regexp.rc: [AT][AT][AGT]ACAAATTATTTTTTT[AT][AT] XX // AC assembly_7 XX ID assembly_7 XX DE wwaACACGTGgww P0 a c g t 1 163 62 81 133 2 153 91 68 127 3 183 69 85 102 4 327 43 20 49 5 17 394 10 18 6 418 3 8 10 7 26 377 4 32 8 18 5 405 11 9 8 1 3 427 10 9 4 415 11 11 63 32 289 55 12 132 85 97 125 13 124 81 91 143 XX CC program: feature CC matrix.nb: 7 CC matrix.nb: 7 CC sites: 439 CC consensus.strict: aaaACACGTGgat CC consensus.strict.rc: ATCCACGTGTTTT CC consensus.IUPAC: wwaACACGTGgww CC consensus.IUPAC.rc: WWCCACGTGTTWW CC consensus.regexp: [at][at]aACACGTGg[at][at] CC consensus.regexp.rc: [AT][AT]CCACGTGTT[AT][AT] XX // AC assembly_8 XX ID assembly_8 XX DE wwTATACGAAww P0 a c g t 1 347 171 123 388 2 444 120 137 328 3 46 20 20 943 4 960 16 12 41 5 40 17 15 957 6 957 16 16 40 7 94 772 32 131 8 142 54 760 73 9 944 17 16 52 10 965 16 13 35 11 436 126 123 344 12 399 136 145 349 XX CC program: feature CC matrix.nb: 8 CC matrix.nb: 8 CC sites: 1029 CC consensus.strict: taTATACGAAaa CC consensus.strict.rc: TTTTCGTATATA CC consensus.IUPAC: wwTATACGAAww CC consensus.IUPAC.rc: WWTTCGTATAWW CC consensus.regexp: [at][at]TATACGAA[at][at] CC consensus.regexp.rc: [AT][AT]TTCGTATA[AT][AT] XX // AC assembly_9 XX ID assembly_9 XX DE wwACTAATTTGTCww P0 a c g t 1 193 92 67 205 2 207 83 92 175 3 491 13 15 38 4 77 383 23 74 5 52 25 13 467 6 487 20 16 34 7 480 15 19 43 8 35 12 13 497 9 25 12 13 507 10 28 13 21 495 11 68 25 385 79 12 36 16 23 482 13 66 382 38 71 14 186 101 79 191 15 191 76 82 208 XX CC program: feature CC matrix.nb: 9 CC matrix.nb: 9 CC sites: 557 CC consensus.strict: taACTAATTTGTCtt CC consensus.strict.rc: AAGACAAATTAGTTA CC consensus.IUPAC: wwACTAATTTGTCww CC consensus.IUPAC.rc: WWGACAAATTAGTWW CC consensus.regexp: [at][at]ACTAATTTGTC[at][at] CC consensus.regexp.rc: [AT][AT]GACAAATTAGT[AT][AT] XX // AC assembly_10 XX ID assembly_10 XX DE wwTATAATAATTTkThww P0 a c g t 1 636 240 192 632 2 654 219 225 602 3 275 104 97 1224 4 1235 102 98 265 5 289 104 93 1214 6 1470 44 54 132 7 1459 61 46 134 8 154 69 60 1417 9 1431 66 53 150 10 1439 42 43 176 11 113 30 49 1508 12 209 69 85 1337 13 188 56 99 1357 14 328 120 820 432 15 297 95 137 1171 16 476 475 221 528 17 614 225 239 622 18 618 230 238 614 XX CC program: feature CC matrix.nb: 10 CC matrix.nb: 10 CC sites: 1700 CC consensus.strict: aaTATAATAATTTgTtta CC consensus.strict.rc: TAAACAAATTATTATATT CC consensus.IUPAC: wwTATAATAATTTkThww CC consensus.IUPAC.rc: WWDAMAAATTATTATAWW CC consensus.regexp: [at][at]TATAATAATTT[gt]T[act][at][at] CC consensus.regexp.rc: [AT][AT][AGT]A[AC]AAATTATTATA[AT][AT] XX // AC assembly_11 XX ID assembly_11 XX DE waACGATAww P0 a c g t 1 119 41 36 102 2 117 49 58 74 3 298 0 0 0 4 0 298 0 0 5 0 0 298 0 6 298 0 0 0 7 0 0 0 298 8 298 0 0 0 9 93 47 47 111 10 108 36 46 108 XX CC program: feature CC matrix.nb: 11 CC matrix.nb: 11 CC sites: 298 CC consensus.strict: aaACGATAta CC consensus.strict.rc: TATATCGTTT CC consensus.IUPAC: waACGATAww CC consensus.IUPAC.rc: WWTATCGTTW CC consensus.regexp: [at]aACGATA[at][at] CC consensus.regexp.rc: [AT][AT]TATCGTT[AT] XX // AC assembly_12 XX ID assembly_12 XX DE wwmAAAAAAwAAwAmTAww P0 a c g t 1 978 331 329 676 2 991 369 297 657 3 746 998 195 375 4 1894 138 90 192 5 1944 98 90 182 6 1967 113 70 164 7 1970 80 79 185 8 2039 71 61 143 9 2014 89 55 156 10 616 113 108 1477 11 1976 94 79 165 12 1938 90 82 204 13 608 108 106 1492 14 1857 87 116 254 15 660 944 201 509 16 481 121 124 1588 17 1807 99 115 293 18 951 306 319 738 19 956 256 305 797 XX CC program: feature CC matrix.nb: 12 CC matrix.nb: 12 CC sites: 2314 CC consensus.strict: aacAAAAAAtAAtAcTAaa CC consensus.strict.rc: TTTAGTATTATTTTTTGTT CC consensus.IUPAC: wwmAAAAAAwAAwAmTAww CC consensus.IUPAC.rc: WWTAKTWTTWTTTTTTKWW CC consensus.regexp: [at][at][ac]AAAAAA[at]AA[at]A[ac]TA[at][at] CC consensus.regexp.rc: [AT][AT]TA[GT]T[AT]TT[AT]TTTTTT[GT][AT][AT] XX // AC assembly_13 XX ID assembly_13 XX DE aamAAAAAAwAAAaw P0 a c g t 1 2250 640 635 1101 2 2273 752 542 1059 3 1700 2138 307 481 4 4145 205 89 187 5 4198 132 106 190 6 4221 127 79 199 7 4250 100 86 190 8 4182 127 96 221 9 4156 118 114 238 10 1921 215 238 2252 11 4143 142 129 212 12 4247 79 90 210 13 4199 89 100 238 14 2508 514 539 1065 15 2326 540 569 1191 XX CC program: feature CC matrix.nb: 13 CC matrix.nb: 13 CC sites: 4626 CC consensus.strict: aacAAAAAAtAAAaa CC consensus.strict.rc: TTTTTATTTTTTGTT CC consensus.IUPAC: aamAAAAAAwAAAaw CC consensus.IUPAC.rc: WTTTTWTTTTTTKTT CC consensus.regexp: aa[ac]AAAAAA[at]AAAa[at] CC consensus.regexp.rc: [AT]TTTT[AT]TTTTTT[GT]TT XX // AC assembly_14 XX ID assembly_14 XX DE wwACGTATAww P0 a c g t 1 1030 367 347 769 2 879 443 346 845 3 2318 37 38 120 4 235 1906 47 325 5 426 94 1803 190 6 105 39 42 2327 7 2280 55 81 97 8 130 64 54 2265 9 2301 54 60 98 10 773 412 320 1008 11 1019 327 382 785 XX CC program: feature CC matrix.nb: 14 CC matrix.nb: 14 CC sites: 2513 CC consensus.strict: aaACGTATAta CC consensus.strict.rc: TATATACGTTT CC consensus.IUPAC: wwACGTATAww CC consensus.IUPAC.rc: WWTATACGTWW CC consensus.regexp: [at][at]ACGTATA[at][at] CC consensus.regexp.rc: [AT][AT]TATACGT[AT][AT] XX // AC assembly_15 XX ID assembly_15 XX DE wwTAGTCAACww P0 a c g t 1 287 111 94 241 2 230 137 98 268 3 71 24 25 613 4 624 12 33 64 5 53 9 614 57 6 20 8 8 697 7 45 634 16 38 8 704 12 9 8 9 705 4 8 16 10 80 587 20 46 11 262 123 108 240 12 295 107 97 234 XX CC program: feature CC matrix.nb: 15 CC matrix.nb: 15 CC sites: 733 CC consensus.strict: atTAGTCAACaa CC consensus.strict.rc: TTGTTGACTAAT CC consensus.IUPAC: wwTAGTCAACww CC consensus.IUPAC.rc: WWGTTGACTAWW CC consensus.regexp: [at][at]TAGTCAAC[at][at] CC consensus.regexp.rc: [AT][AT]GTTGACTA[AT][AT] XX // AC assembly_16 XX ID assembly_16 XX DE waAACACGTGwww P0 a c g t 1 232 98 125 178 2 264 112 99 158 3 483 42 56 52 4 503 39 36 55 5 44 554 14 21 6 599 11 11 12 7 39 549 10 35 8 49 5 560 19 9 17 3 3 610 10 28 12 552 41 11 253 62 127 191 12 195 115 118 205 13 208 106 108 211 XX CC program: feature CC matrix.nb: 16 CC matrix.nb: 16 CC sites: 633 CC consensus.strict: aaAACACGTGatt CC consensus.strict.rc: AATCACGTGTTTT CC consensus.IUPAC: waAACACGTGwww CC consensus.IUPAC.rc: WWWCACGTGTTTW CC consensus.regexp: [at]aAACACGTG[at][at][at] CC consensus.regexp.rc: [AT][AT][AT]CACGTGTTT[AT] XX // AC assembly_17 XX ID assembly_17 XX DE wwAACGCGTAww P0 a c g t 1 90 56 55 96 2 116 51 31 99 3 273 6 2 16 4 280 9 2 6 5 14 265 2 16 6 28 7 238 24 7 17 256 4 20 8 21 2 268 6 9 3 6 11 277 10 237 9 11 40 11 116 46 49 86 12 107 36 54 100 XX CC program: feature CC matrix.nb: 17 CC matrix.nb: 17 CC sites: 297 CC consensus.strict: taAACGCGTAaa CC consensus.strict.rc: TTTACGCGTTTA CC consensus.IUPAC: wwAACGCGTAww CC consensus.IUPAC.rc: WWTACGCGTTWW CC consensus.regexp: [at][at]AACGCGTA[at][at] CC consensus.regexp.rc: [AT][AT]TACGCGTT[AT][AT] XX // AC assembly_18 XX ID assembly_18 XX DE wkGACCCAww P0 a c g t 1 63 28 38 88 2 51 23 60 83 3 0 0 217 0 4 217 0 0 0 5 0 217 0 0 6 0 217 0 0 7 0 217 0 0 8 217 0 0 0 9 94 42 12 69 10 73 35 43 66 XX CC program: feature CC matrix.nb: 18 CC matrix.nb: 18 CC sites: 217 CC consensus.strict: ttGACCCAaa CC consensus.strict.rc: TTTGGGTCAA CC consensus.IUPAC: wkGACCCAww CC consensus.IUPAC.rc: WWTGGGTCMW CC consensus.regexp: [at][gt]GACCCA[at][at] CC consensus.regexp.rc: [AT][AT]TGGGTC[AC][AT] XX // AC assembly_19 XX ID assembly_19 XX DE wwmAAAAAAtAATTaTTTTTTkww P0 a c g t 1 597 222 171 496 2 625 205 190 466 3 548 491 134 313 4 1152 91 69 174 5 1187 81 66 152 6 1154 89 71 172 7 1145 80 66 195 8 1133 98 64 191 9 1143 83 64 196 10 331 102 75 978 11 1101 97 87 201 12 1097 62 84 243 13 243 84 62 1097 14 201 87 97 1101 15 978 75 102 331 16 196 64 83 1143 17 191 64 98 1133 18 195 66 80 1145 19 172 71 89 1154 20 152 66 81 1187 21 174 69 91 1152 22 313 134 491 548 23 466 190 205 625 24 496 171 222 597 XX CC program: feature CC matrix.nb: 19 CC matrix.nb: 19 CC sites: 1486 CC consensus.strict: aaaAAAAAAtAATTaTTTTTTttt CC consensus.strict.rc: AAAAAAAAATAATTATTTTTTTTT CC consensus.IUPAC: wwmAAAAAAtAATTaTTTTTTkww CC consensus.IUPAC.rc: WWMAAAAAATAATTATTTTTTKWW CC consensus.regexp: [at][at][ac]AAAAAAtAATTaTTTTTT[gt][at][at] CC consensus.regexp.rc: [AT][AT][AC]AAAAAATAATTATTTTTT[GT][AT][AT] XX // AC assembly_20 XX ID assembly_20 XX DE wdGTCCAAaw P0 a c g t 1 110 47 59 123 2 106 44 86 103 3 0 0 339 0 4 0 0 0 339 5 0 339 0 0 6 0 339 0 0 7 339 0 0 0 8 339 0 0 0 9 166 56 47 70 10 135 56 53 95 XX CC program: feature CC matrix.nb: 20 CC matrix.nb: 20 CC sites: 339 CC consensus.strict: taGTCCAAaa CC consensus.strict.rc: TTTTGGACTA CC consensus.IUPAC: wdGTCCAAaw CC consensus.IUPAC.rc: WTTTGGACHW CC consensus.regexp: [at][agt]GTCCAAa[at] CC consensus.regexp.rc: [AT]TTTGGAC[ACT][AT] XX //