AC assembly_1 XX ID assembly_1 XX DE wwAATAATgTgAww P0 a c g t 1 772 313 296 585 2 794 298 288 586 3 1714 53 71 128 4 1722 58 53 133 5 273 92 90 1511 6 1610 101 100 155 7 1703 44 62 157 8 168 37 54 1707 9 290 94 1279 303 10 171 49 50 1696 11 280 135 1292 259 12 1676 45 81 164 13 717 298 268 683 14 712 253 319 682 XX CC program: feature CC matrix.nb: 1 CC matrix.nb: 1 CC sites: 1966 CC consensus.strict: aaAATAATgTgAaa CC consensus.strict.rc: TTTCACATTATTTT CC consensus.IUPAC: wwAATAATgTgAww CC consensus.IUPAC.rc: WWTCACATTATTWW CC consensus.regexp: [at][at]AATAATgTgA[at][at] CC consensus.regexp.rc: [AT][AT]TCACATTATT[AT][AT] XX // AC assembly_2 XX ID assembly_2 XX DE wwwTCATTTATwww P0 a c g t 1 861 371 350 1064 2 905 411 344 986 3 1003 370 301 972 4 118 50 53 2425 5 295 1916 111 324 6 2412 38 47 149 7 149 44 35 2418 8 165 49 68 2364 9 101 63 55 2427 10 2249 84 84 229 11 197 104 96 2249 12 719 580 376 971 13 813 372 342 1119 14 913 419 348 966 XX CC program: feature CC matrix.nb: 2 CC matrix.nb: 2 CC sites: 2646 CC consensus.strict: ttaTCATTTATttt CC consensus.strict.rc: AAAATAAATGATAA CC consensus.IUPAC: wwwTCATTTATwww CC consensus.IUPAC.rc: WWWATAAATGAWWW CC consensus.regexp: [at][at][at]TCATTTAT[at][at][at] CC consensus.regexp.rc: [AT][AT][AT]ATAAATGA[AT][AT][AT] XX // AC assembly_3 XX ID assembly_3 XX DE wwcCATGCATGgww P0 a c g t 1 127 56 67 102 2 120 60 48 124 3 77 197 35 43 4 41 278 14 19 5 328 5 7 12 6 14 6 3 329 7 14 7 305 26 8 26 305 7 14 9 329 3 6 14 10 12 7 5 328 11 19 14 278 41 12 43 35 197 77 13 124 48 60 120 14 102 67 56 127 XX CC program: feature CC matrix.nb: 3 CC matrix.nb: 3 CC sites: 352 CC consensus.strict: atcCATGCATGgat CC consensus.strict.rc: ATCCATGCATGGAT CC consensus.IUPAC: wwcCATGCATGgww CC consensus.IUPAC.rc: WWCCATGCATGGWW CC consensus.regexp: [at][at]cCATGCATGg[at][at] CC consensus.regexp.rc: [AT][AT]CCATGCATGG[AT][AT] XX // AC assembly_4 XX ID assembly_4 XX DE wwATCTAAwww P0 a c g t 1 322 129 119 271 2 329 139 106 267 3 841 0 0 0 4 0 0 0 841 5 0 841 0 0 6 0 0 0 841 7 841 0 0 0 8 841 0 0 0 9 343 134 118 246 10 315 152 115 259 11 304 140 123 274 XX CC program: feature CC matrix.nb: 4 CC matrix.nb: 4 CC sites: 841 CC consensus.strict: aaATCTAAaaa CC consensus.strict.rc: TTTTTAGATTT CC consensus.IUPAC: wwATCTAAwww CC consensus.IUPAC.rc: WWWTTAGATWW CC consensus.regexp: [at][at]ATCTAA[at][at][at] CC consensus.regexp.rc: [AT][AT][AT]TTAGAT[AT][AT] XX // AC assembly_5 XX ID assembly_5 XX DE wwGGGACCAww P0 a c g t 1 208 72 130 250 2 197 77 105 281 3 53 25 494 88 4 43 18 559 40 5 32 20 579 29 6 604 20 7 29 7 34 593 6 27 8 62 565 10 23 9 611 18 13 18 10 254 122 87 197 11 247 112 97 204 XX CC program: feature CC matrix.nb: 5 CC matrix.nb: 5 CC sites: 660 CC consensus.strict: ttGGGACCAaa CC consensus.strict.rc: TTTGGTCCCAA CC consensus.IUPAC: wwGGGACCAww CC consensus.IUPAC.rc: WWTGGTCCCWW CC consensus.regexp: [at][at]GGGACCA[at][at] CC consensus.regexp.rc: [AT][AT]TGGTCCC[AT][AT] XX // AC assembly_6 XX ID assembly_6 XX DE wwAATTATTww P0 a c g t 1 3634 1535 1358 3574 2 3810 1573 1292 3426 3 8831 327 236 707 4 8807 218 230 846 5 912 278 227 8684 6 790 356 356 8599 7 8642 261 375 823 8 689 243 313 8856 9 601 231 292 8977 10 2985 1266 1581 4269 11 3289 1295 1560 3957 XX CC program: feature CC matrix.nb: 6 CC matrix.nb: 6 CC sites: 10101 CC consensus.strict: aaAATTATTtt CC consensus.strict.rc: AAAATAATTTT CC consensus.IUPAC: wwAATTATTww CC consensus.IUPAC.rc: WWAATAATTWW CC consensus.regexp: [at][at]AATTATT[at][at] CC consensus.regexp.rc: [AT][AT]AATAATT[AT][AT] XX // AC assembly_7 XX ID assembly_7 XX DE wwTCACATGwww P0 a c g t 1 753 365 337 775 2 728 343 360 799 3 121 88 63 1958 4 150 1803 99 178 5 2048 55 32 95 6 167 1854 48 161 7 2052 21 73 84 8 104 33 16 2077 9 179 99 1739 213 10 662 418 376 774 11 772 361 355 742 12 752 385 277 816 XX CC program: feature CC matrix.nb: 7 CC matrix.nb: 7 CC sites: 2230 CC consensus.strict: ttTCACATGtat CC consensus.strict.rc: ATACATGTGAAA CC consensus.IUPAC: wwTCACATGwww CC consensus.IUPAC.rc: WWWCATGTGAWW CC consensus.regexp: [at][at]TCACATG[at][at][at] CC consensus.regexp.rc: [AT][AT][AT]CATGTGA[AT][AT] XX // AC assembly_8 XX ID assembly_8 XX DE wwAACTATATww P0 a c g t 1 983 400 344 759 2 1041 408 286 751 3 2296 35 40 115 4 2310 46 28 102 5 383 1774 86 243 6 136 65 32 2253 7 2336 36 26 88 8 115 44 33 2294 9 1953 106 149 278 10 281 109 112 1984 11 1011 296 367 812 12 767 334 323 1062 XX CC program: feature CC matrix.nb: 8 CC matrix.nb: 8 CC sites: 2486 CC consensus.strict: aaAACTATATat CC consensus.strict.rc: ATATATAGTTTT CC consensus.IUPAC: wwAACTATATww CC consensus.IUPAC.rc: WWATATAGTTWW CC consensus.regexp: [at][at]AACTATAT[at][at] CC consensus.regexp.rc: [AT][AT]ATATAGTT[AT][AT] XX // AC assembly_9 XX ID assembly_9 XX DE wwTATACACww P0 a c g t 1 881 430 377 1162 2 1222 370 402 856 3 139 83 55 2573 4 2622 50 62 116 5 125 95 60 2570 6 2593 77 52 128 7 270 2095 107 378 8 2706 26 27 91 9 319 2088 84 359 10 1261 371 358 860 11 1018 495 302 1035 XX CC program: feature CC matrix.nb: 9 CC matrix.nb: 9 CC sites: 2850 CC consensus.strict: taTATACACat CC consensus.strict.rc: ATGTGTATATA CC consensus.IUPAC: wwTATACACww CC consensus.IUPAC.rc: WWGTGTATAWW CC consensus.regexp: [at][at]TATACAC[at][at] CC consensus.regexp.rc: [AT][AT]GTGTATA[AT][AT] XX // AC assembly_10 XX ID assembly_10 XX DE wwAACATGGww P0 a c g t 1 751 322 333 571 2 789 325 325 538 3 1770 92 47 68 4 1843 31 36 67 5 267 1480 79 151 6 1847 9 31 90 7 61 12 11 1893 8 120 46 1661 150 9 201 98 1458 220 10 697 279 364 637 11 644 341 323 669 XX CC program: feature CC matrix.nb: 10 CC matrix.nb: 10 CC sites: 1977 CC consensus.strict: aaAACATGGat CC consensus.strict.rc: ATCCATGTTTT CC consensus.IUPAC: wwAACATGGww CC consensus.IUPAC.rc: WWCCATGTTWW CC consensus.regexp: [at][at]AACATGG[at][at] CC consensus.regexp.rc: [AT][AT]CCATGTT[AT][AT] XX // AC assembly_11 XX ID assembly_11 XX DE wwAAAATGATww P0 a c g t 1 1330 496 531 1025 2 1338 551 586 907 3 2649 203 195 335 4 3197 39 53 93 5 3131 63 65 123 6 3197 30 54 101 7 166 51 59 3106 8 374 212 2517 279 9 3043 46 97 196 10 463 180 210 2529 11 1196 433 572 1181 12 1333 428 473 1148 XX CC program: feature CC matrix.nb: 11 CC matrix.nb: 11 CC sites: 3382 CC consensus.strict: aaAAAATGATaa CC consensus.strict.rc: TTATCATTTTTT CC consensus.IUPAC: wwAAAATGATww CC consensus.IUPAC.rc: WWATCATTTTWW CC consensus.regexp: [at][at]AAAATGAT[at][at] CC consensus.regexp.rc: [AT][AT]ATCATTTT[AT][AT] XX // AC assembly_12 XX ID assembly_12 XX DE wwAATACACww P0 a c g t 1 1051 447 361 941 2 1233 428 388 751 3 2515 83 55 147 4 2582 54 63 101 5 239 103 67 2391 6 2544 72 51 133 7 271 2186 84 259 8 2640 40 18 102 9 344 2081 81 294 10 1241 349 353 857 11 1088 417 329 966 XX CC program: feature CC matrix.nb: 12 CC matrix.nb: 12 CC sites: 2800 CC consensus.strict: aaAATACACaa CC consensus.strict.rc: TTGTGTATTTT CC consensus.IUPAC: wwAATACACww CC consensus.IUPAC.rc: WWGTGTATTWW CC consensus.regexp: [at][at]AATACAC[at][at] CC consensus.regexp.rc: [AT][AT]GTGTATT[AT][AT] XX // AC assembly_13 XX ID assembly_13 XX DE wwCTTATCww P0 a c g t 1 141 58 44 141 2 104 58 63 159 3 0 384 0 0 4 0 0 0 384 5 0 0 0 384 6 384 0 0 0 7 0 0 0 384 8 0 384 0 0 9 136 65 46 137 10 130 62 38 154 XX CC program: feature CC matrix.nb: 13 CC matrix.nb: 13 CC sites: 384 CC consensus.strict: atCTTATCtt CC consensus.strict.rc: AAGATAAGAT CC consensus.IUPAC: wwCTTATCww CC consensus.IUPAC.rc: WWGATAAGWW CC consensus.regexp: [at][at]CTTATC[at][at] CC consensus.regexp.rc: [AT][AT]GATAAG[AT][AT] XX // AC assembly_14 XX ID assembly_14 XX DE wwTATACAAww P0 a c g t 1 1902 852 742 2079 2 2345 750 789 1691 3 344 149 138 4944 4 4954 145 143 333 5 419 162 128 4866 6 4966 203 131 275 7 708 3927 233 707 8 5127 109 96 243 9 4985 147 84 359 10 2343 745 749 1738 11 2078 778 718 2001 XX CC program: feature CC matrix.nb: 14 CC matrix.nb: 14 CC sites: 5575 CC consensus.strict: taTATACAAaa CC consensus.strict.rc: TTTTGTATATA CC consensus.IUPAC: wwTATACAAww CC consensus.IUPAC.rc: WWTTGTATAWW CC consensus.regexp: [at][at]TATACAA[at][at] CC consensus.regexp.rc: [AT][AT]TTGTATA[AT][AT] XX // AC assembly_15 XX ID assembly_15 XX DE wwGACAAATww P0 a c g t 1 1331 508 641 1273 2 1442 550 520 1241 3 556 204 2658 335 4 3475 86 59 133 5 477 2812 186 278 6 3517 77 44 115 7 3506 76 50 121 8 3514 49 77 113 9 356 93 85 3219 10 1273 607 689 1184 11 1454 516 488 1295 XX CC program: feature CC matrix.nb: 15 CC matrix.nb: 15 CC sites: 3753 CC consensus.strict: aaGACAAATaa CC consensus.strict.rc: TTATTTGTCTT CC consensus.IUPAC: wwGACAAATww CC consensus.IUPAC.rc: WWATTTGTCWW CC consensus.regexp: [at][at]GACAAAT[at][at] CC consensus.regexp.rc: [AT][AT]ATTTGTC[AT][AT] XX // AC assembly_16 XX ID assembly_16 XX DE wwGTACCAww P0 a c g t 1 82 26 23 68 2 61 33 29 76 3 0 0 199 0 4 0 0 0 199 5 199 0 0 0 6 0 199 0 0 7 0 199 0 0 8 199 0 0 0 9 78 43 14 64 10 81 36 28 54 XX CC program: feature CC matrix.nb: 16 CC matrix.nb: 16 CC sites: 199 CC consensus.strict: atGTACCAaa CC consensus.strict.rc: TTTGGTACAT CC consensus.IUPAC: wwGTACCAww CC consensus.IUPAC.rc: WWTGGTACWW CC consensus.regexp: [at][at]GTACCA[at][at] CC consensus.regexp.rc: [AT][AT]TGGTAC[AT][AT] XX // AC assembly_17 XX ID assembly_17 XX DE waTATAyATAyww P0 a c g t 1 1089 571 418 2050 2 2220 457 462 989 3 157 75 69 3827 4 3805 72 89 162 5 147 113 61 3807 6 3796 87 107 138 7 329 2101 138 1560 8 3937 40 59 92 9 440 256 102 3330 10 3488 120 211 309 11 761 1348 297 1722 12 2138 433 489 1068 13 1224 541 414 1949 XX CC program: feature CC matrix.nb: 17 CC matrix.nb: 17 CC sites: 4128 CC consensus.strict: taTATAcATAtat CC consensus.strict.rc: ATATATGTATATA CC consensus.IUPAC: waTATAyATAyww CC consensus.IUPAC.rc: WWRTATRTATATW CC consensus.regexp: [at]aTATA[ct]ATA[ct][at][at] CC consensus.regexp.rc: [AT][AT][AG]TAT[AG]TATAT[AT] XX // AC assembly_18 XX ID assembly_18 XX DE wwrATAAATaww P0 a c g t 1 1187 401 464 1173 2 1337 442 396 1050 3 844 324 1450 607 4 3090 29 38 68 5 200 46 64 2915 6 3079 38 51 57 7 3016 38 32 139 8 3095 37 30 63 9 128 53 61 2983 10 1943 237 332 713 11 1231 429 434 1131 12 1330 394 467 1034 XX CC program: feature CC matrix.nb: 18 CC matrix.nb: 18 CC sites: 3225 CC consensus.strict: aagATAAATaaa CC consensus.strict.rc: TTTATTTATCTT CC consensus.IUPAC: wwrATAAATaww CC consensus.IUPAC.rc: WWTATTTATYWW CC consensus.regexp: [at][at][ag]ATAAATa[at][at] CC consensus.regexp.rc: [AT][AT]TATTTAT[CT][AT][AT] XX // AC assembly_19 XX ID assembly_19 XX DE wwGTGATAww P0 a c g t 1 151 51 49 135 2 124 36 60 166 3 0 0 386 0 4 0 0 0 386 5 0 0 386 0 6 386 0 0 0 7 0 0 0 386 8 386 0 0 0 9 140 53 49 144 10 144 44 67 131 XX CC program: feature CC matrix.nb: 19 CC matrix.nb: 19 CC sites: 386 CC consensus.strict: atGTGATAta CC consensus.strict.rc: TATATCACAT CC consensus.IUPAC: wwGTGATAww CC consensus.IUPAC.rc: WWTATCACWW CC consensus.regexp: [at][at]GTGATA[at][at] CC consensus.regexp.rc: [AT][AT]TATCAC[AT][AT] XX // AC assembly_20 XX ID assembly_20 XX DE wwATATAGTAww P0 a c g t 1 771 237 217 575 2 587 263 195 755 3 1665 29 41 65 4 126 34 22 1618 5 1663 23 36 78 6 87 38 38 1637 7 1653 23 52 72 8 209 108 1261 222 9 110 42 37 1611 10 1607 40 35 118 11 633 223 256 688 12 689 197 246 668 XX CC program: feature CC matrix.nb: 20 CC matrix.nb: 20 CC sites: 1800 CC consensus.strict: atATATAGTAta CC consensus.strict.rc: TATACTATATAT CC consensus.IUPAC: wwATATAGTAww CC consensus.IUPAC.rc: WWTACTATATWW CC consensus.regexp: [at][at]ATATAGTA[at][at] CC consensus.regexp.rc: [AT][AT]TACTATAT[AT][AT] XX //