/var/www/html/rsat/public_html/tmp/www-data/2026/08/17/matrix-clustering_2026-08-17.083003_9UcsPJ/matrix-clustering_tables/alignment_table.tab


id name cluster strand offset_up offset_down width aligned_consensus aligned_consensus_rc
Collection_1_m25_homer_25.GATAAGRT homer_25.GATAAGRT cluster_1 R 6 8 22 ++++++AYCTTATC++++++++ ++++++++GATAAGrT++++++
Collection_1_m26_homer_26.AYCTTATC homer_26.AYCTTATC cluster_1 D 6 8 22 ++++++AyCTTATC++++++++ ++++++++GATAAGRT++++++
Collection_1_m7_homer_7.GCCACGTG homer_7.GCCACGTG cluster_1 R 5 9 22 +++++CACGTGKC+++++++++ +++++++++GmCACGTG+++++
Collection_1_m11_homer_11.CACGTGGC homer_11.CACGTGGC cluster_1 D 5 9 22 +++++CACGTGkC+++++++++ +++++++++GMCACGTG+++++
Collection_1_m3_homer_3.NNBCACGTGN homer_3.NNBCACGTGN cluster_1 R 4 8 22 ++++YCAYRTGVSH++++++++ ++++++++dsbCAYrTGr++++
Collection_1_m16_homer_16.BCACGTGVDN homer_16.BCACGTGVDN cluster_1 D 4 8 22 ++++yCACRTGrwd++++++++ ++++++++HWYCAYGTGR++++
Collection_1_m9_homer_9.DRATCACGTGAB homer_9.DRATCACGTGAB cluster_1 R 3 7 22 +++VKCACGTGATYW+++++++ +++++++wratCACGTGmb+++
Collection_1_m15_homer_15.TWVTCACGTGAB homer_15.TWVTCACGTGAB cluster_1 R 3 7 22 +++RTCACGTGAYWM+++++++ +++++++kwrtCACGTGay+++
Collection_1_m8_homer_8.NNNNCACGTGNNNNN homer_8.NNNNCACGTGNNNNN cluster_1 D 1 6 22 +wwyrCACGTGyrwww++++++ ++++++WWWYRCACGTGYRWW+
Collection_1_m18_homer_18.NNWSACACGTGTSWN homer_18.NNWSACACGTGTSWN cluster_1 R 1 6 22 +TWSRCACGTGYSWAW++++++ ++++++wtwsrCACGTGyswa+
Collection_1_m10_homer_10.WNBCACGTGA homer_10.WNBCACGTGA cluster_1 R 4 8 22 ++++TCACGTGRMW++++++++ ++++++++wkyCACGTGa++++
Collection_1_m4_homer_4.NNNNCACGTGNN homer_4.NNNNCACGTGNN cluster_1 R 3 7 22 +++RKCACGTGMHWW+++++++ +++++++wwdkCACGTGmy+++
Collection_1_m12_homer_12.NTTGACAGCTGTCAN homer_12.NTTGACAGCTGTCAN cluster_1 R 1 6 22 +WTKMCAGCTGKMAAW++++++ ++++++wttkmCAGCTGkmaw+
Collection_1_m19_homer_19.NDNHCAGCTGTCANN homer_19.NDNHCAGCTGTCANN cluster_1 D 1 6 22 +wkdhcAGCTGkmwww++++++ ++++++WWWKMCAGCTGDHMW+
Collection_1_m5_homer_5.NNNNNNCACGTGNNN homer_5.NNNNNNCACGTGNNN cluster_1 R 2 5 22 ++WYRCACGTGYRWWWW+++++ +++++wwwwyrCACGTGyrw++
Collection_1_m14_homer_14.HGWGRHWGACACGTG homer_14.HGWGRHWGACACGTG cluster_1 R 5 2 22 +++++CACGTGYMWDYYWCK++ ++mgwrrhwkrCACGTG+++++
Collection_1_m23_homer_23.NNNNNNVTCACGTGM homer_23.NNNNNNVTCACGTGM cluster_1 R 4 3 22 ++++KCACGTGMBWYWYAY+++ +++rtrwrwvkCACGTGm++++
Collection_1_m6_homer_6.NWDCCGTTAC homer_6.NWDCCGTTAC cluster_1 D 3 9 22 +++wddCsGTTAC+++++++++ +++++++++GTAACSGHHW+++
Collection_1_m13_homer_13.YRACCGTTACDD homer_13.YRACCGTTACDD cluster_1 D 3 7 22 +++yrdmsGTTAYrw+++++++ +++++++WYRTAACSKHYR+++
Collection_1_m1_homer_1.BYYACCWACY homer_1.BYYACCWACY cluster_1 D 8 4 22 ++++++++yyyACCwAmy++++ ++++RKTWGGTRRR++++++++
Collection_1_m2_homer_2.YACCWAMC homer_2.YACCWAMC cluster_1 D 10 4 22 ++++++++++yACCwAmY++++ ++++RKTWGGTR++++++++++
Collection_1_m24_homer_24.ADBSTTATCY homer_24.ADBSTTATCY cluster_1 D 5 7 22 +++++RGATAASRTT+++++++ +++++++aaysttATCy+++++
Collection_1_m21_homer_21.AWWTAACCGTTR homer_21.AWWTAACCGTTR cluster_1 D 0 10 22 YAACGGYYAWWW++++++++++ ++++++++++wwwtrrCCGTTr
Collection_1_m20_homer_20.WWAARKTAGGTGRAA homer_20.WWAARKTAGGTGRAA cluster_1 R 7 0 22 +++++++TYYYACCTAMYWWWW wwwWrkTAGGTrrra+++++++
Collection_1_m17_homer_17.KACACGTCTCTY homer_17.KACACGTCTCTY cluster_1 D 3 7 22 +++krcACGTCTCty+++++++ +++++++RAGAGACGTGYM+++
Collection_1_m22_homer_22.CTCTCTCTCY homer_22.CTCTCTCTCY cluster_1 D 8 4 22 ++++++++RGWSASWGWG++++ ++++cwcwStswcy++++++++