| Input files | |
|---|---|
| ctrl_seq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/peak-motifscontrol_seq |
| motif_db_cisBP_Mus_musculus |
/var/www/html/rsat/public_html/motif_databases/cisBP2/cisBP_Mus_musculus_2019.tf |
| test_seq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/peak-motifspeak_seq |
| Directories | |
| output |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/ |
| Output files | |
| 1nt_ctrl_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_freq-1str-ovlp_1nt.tab |
| 1nt_ctrl_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_heatmap-1str-ovlp_1nt.png |
| 1nt_ctrl_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_inclusive-1str-ovlp_1nt.txt |
| 1nt_ctrl_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_1nt_ci20.tab |
| 1nt_ctrl_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_1nt_ci20.png |
| 1nt_ctrl_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_1nt_ci20_graph_index.html |
| 1nt_ctrl_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_transitions-1str-ovlp_1nt.tab |
| 1nt_test_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_freq-1str-ovlp_1nt.tab |
| 1nt_test_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_heatmap-1str-ovlp_1nt.png |
| 1nt_test_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_inclusive-1str-ovlp_1nt.txt |
| 1nt_test_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab |
| 1nt_test_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.png |
| 1nt_test_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20_graph_index.html |
| 1nt_test_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_transitions-1str-ovlp_1nt.tab |
| 2nt_ctrl_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_freq-1str-ovlp_2nt.tab |
| 2nt_ctrl_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_heatmap-1str-ovlp_2nt.png |
| 2nt_ctrl_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_inclusive-1str-ovlp_2nt.txt |
| 2nt_ctrl_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.tab |
| 2nt_ctrl_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.png |
| 2nt_ctrl_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20_graph_index.html |
| 2nt_ctrl_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_ctrl_transitions-1str-ovlp_2nt.tab |
| 2nt_test_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_freq-1str-ovlp_2nt.tab |
| 2nt_test_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_heatmap-1str-ovlp_2nt.png |
| 2nt_test_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_inclusive-1str-ovlp_2nt.txt |
| 2nt_test_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab |
| 2nt_test_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.png |
| 2nt_test_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20_graph_index.html |
| 2nt_test_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/composition/peak-motifs_test_transitions-1str-ovlp_2nt.tab |
| archive |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/peak-motifs_archive.zip |
| ctrl_converted |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/data/sequences/peak-motifs_ctrl.fasta |
| ctrl_purged |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/data/sequences/peak-motifs_ctrl_purged_ml40_mis3.fasta |
| ctrl_seqlen |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/data/sequences/peak-motifs_ctrl_seqlen.tab |
| ctrl_seqlen_distrib |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/data/sequences/peak-motifs_ctrl_seqlen_distrib.tab |
| ctrl_seqlen_distrib_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/data/sequences/peak-motifs_ctrl_seqlen_distrib.png |
| links |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/reports/peak-motifs_links.html |
| log |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/reports/peak-motifs_log.txt |
| merged_sites |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/sites/peak-motifs_all_motifs_seqcoord.tab |
| merged_sites_bed |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/sites/peak-motifs_all_motifs_seqcoord.bed |
| merged_words |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/merged_words/peak-motifs_merged_words.tab |
| merged_words_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/merged_words/peak-motifs_merged_words_heatmap.png |
| merged_words_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/merged_words/peak-motifs_merged_words.html |
| motifs_disco_clusters |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_discovered_clusters |
| motifs_disco_clusters_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_discovered_clusters_SUMMARY.html |
| motifs_disco_compa |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab |
| motifs_disco_compa_alignments_1ton |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab |
| motifs_disco_compa_alignments_1ton_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html |
| motifs_disco_compa_gml |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_disco_compa.gml |
| motifs_disco_compa_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_disco_compa.html |
| motifs_discovered |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_discovered.tf |
| motifs_discovered_table |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_motifs/peak-motifs_motifs_discovered_table.tab |
| motifs_vs_db_cisBP_Mus_musculus |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Mus_musculus.tab |
| motifs_vs_db_cisBP_Mus_musculus_alignments_1ton |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Mus_musculus_alignments_1ton.tab |
| motifs_vs_db_cisBP_Mus_musculus_alignments_1ton_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Mus_musculus_alignments_1ton.html |
| motifs_vs_db_cisBP_Mus_musculus_gml |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Mus_musculus.gml |
| motifs_vs_db_cisBP_Mus_musculus_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/discovered_vs_db/peak-motifs_motifs_vs_db_cisBP_Mus_musculus.html |
| oligos_6nt_test_vs_ctrl |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl.tab |
| oligos_6nt_test_vs_ctrl_2pssm |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_log.txt |
| oligos_6nt_test_vs_ctrl_asmb |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm.asmb |
| oligos_6nt_test_vs_ctrl_bg_file |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos_bg_from_ctrl_6nt-2str-noov.tab |
| oligos_6nt_test_vs_ctrl_pssm_counts |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt |
| oligos_6nt_test_vs_ctrl_pssm_logo1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1.png |
| oligos_6nt_test_vs_ctrl_pssm_logo2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2.png |
| oligos_6nt_test_vs_ctrl_pssm_logo3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3.png |
| oligos_6nt_test_vs_ctrl_pssm_logo4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4.png |
| oligos_6nt_test_vs_ctrl_pssm_logo5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5.png |
| oligos_6nt_test_vs_ctrl_pssm_logo_rc1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m1_rc.png |
| oligos_6nt_test_vs_ctrl_pssm_logo_rc2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m2_rc.png |
| oligos_6nt_test_vs_ctrl_pssm_logo_rc3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m3_rc.png |
| oligos_6nt_test_vs_ctrl_pssm_logo_rc4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m4_rc.png |
| oligos_6nt_test_vs_ctrl_pssm_logo_rc5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices_logo_m5_rc.png |
| oligos_6nt_test_vs_ctrl_pssm_sig |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_sig_matrices.tf |
| oligos_6nt_test_vs_ctrl_pssm_tf |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf |
| oligos_7nt_test_vs_ctrl |
/var/www/html/rsat/public_html/tmp/www-data/2025/01/05/peak-motifs.2025-01-05.234618_2025-01-05.234618_Mz6i18/results/oligos_7nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_7nt_test_vs_ctrl.tab |
| oligos_7nt_test_vs_ctrl_2pssm |
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| oligos_7nt_test_vs_ctrl_pssm_counts |
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| oligos_7nt_test_vs_ctrl_pssm_logo3 |
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| oligos_7nt_test_vs_ctrl_pssm_logo4 |
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| oligos_7nt_test_vs_ctrl_pssm_logo5 |
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| oligos_7nt_test_vs_ctrl_pssm_logo_rc1 |
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| oligos_7nt_test_vs_ctrl_pssm_logo_rc2 |
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| oligos_7nt_test_vs_ctrl_pssm_logo_rc3 |
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| oligos_7nt_test_vs_ctrl_pssm_logo_rc4 |
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| oligos_7nt_test_vs_ctrl_pssm_logo_rc5 |
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| oligos_7nt_test_vs_ctrl_pssm_sig |
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| oligos_7nt_test_vs_ctrl_pssm_tf |
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| small_summary_txt |
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| synthesis |
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| test_converted |
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| test_seqlen |
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| test_seqlen_distrib |
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| timelog |
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| timelog_html |
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| timetable |
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