peak-motifs list

Motif discovery

Motif 1 oligos_6nt_mkv2_m1

k-mer sig=2.28; evalue=0.0052

ytCaCCaaCCCmm

KKGGGTTGGTGAR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ytCaCCaaCCCmm

7237_MYB111_2_ArabidopsisPBM_20140210_ 7237_MYB111_2_ArabidopsisPBM_20140210_ R 10 0.7692 0.798 0.614 NA NA

7242_MYB55_ArabidopsisPBM_20140210_ 7242_MYB55_ArabidopsisPBM_20140210_ D 10 0.7692 0.782 0.602 NA NA

7236_MYB111_ArabidopsisPBM_20140210_ 7236_MYB111_ArabidopsisPBM_20140210_ R 10 0.7692 0.752 0.578 NA NA

Total matches= 5 (2 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 12 (70.59%)
Max nb of predicted sites per peak: 6
(HST)
Mean nb of predicted sites per peak: 2.92

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv2_m2

k-mer sig=2.18; evalue=0.0066

ygCaTGCatr

YATGCATGCR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 7
(CYP82C4)
Mean nb of predicted sites per peak: 3.22

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv2_m3

k-mer sig=1.11; evalue=0.078

atTAATTAkt

AMTAATTAAT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor atTAATTAkt

7278_WOX13_2_ArabidopsisPBM_20140210_ 7278_WOX13_2_ArabidopsisPBM_20140210_ D 10 1.0000 0.907 0.907 NA NA

7184_AHL12_2_ArabidopsisPBM_20140210_ 7184_AHL12_2_ArabidopsisPBM_20140210_ D 10 1.0000 0.826 0.826 NA NA

7231_ICU4_ArabidopsisPBM_20140210_ 7231_ICU4_ArabidopsisPBM_20140210_ R 9 0.8182 0.786 0.643 NA NA

Total matches= 9 (6 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 0 (0.00%)
Max nb of predicted sites per peak:
Mean nb of predicted sites per peak: 0.00

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv2_m4

k-mer sig=0.74; evalue=0.18

mvAAAACAaa

TTTGTTTTBK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mvAAAACAaa

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 2 (11.76%)
Max nb of predicted sites per peak: 1
(HST)
Mean nb of predicted sites per peak: 1.00

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv2_m5

k-mer sig=0.24; evalue=0.58

mrAAGAAArr

YYTTTCTTYK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mrAAGAAArr

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 2 (11.76%)
Max nb of predicted sites per peak: 2
(HST)
Mean nb of predicted sites per peak: 1.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 oligos_7nt_mkv2_m1

k-mer sig=4.92; evalue=1.2e-05

mttCaCCaACCCcc

GGGGGTTGGTGAAK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mttCaCCaACCCcc

7242_MYB55_ArabidopsisPBM_20140210_ 7242_MYB55_ArabidopsisPBM_20140210_ D 10 0.7143 0.770 0.550 NA NA

7237_MYB111_2_ArabidopsisPBM_20140210_ 7237_MYB111_2_ArabidopsisPBM_20140210_ R 10 0.7143 0.766 0.547 NA NA

7236_MYB111_ArabidopsisPBM_20140210_ 7236_MYB111_ArabidopsisPBM_20140210_ R 10 0.7143 0.705 0.504 NA NA

Total matches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (58.82%)
Max nb of predicted sites per peak: 5
(HST)
Mean nb of predicted sites per peak: 2.80

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 oligos_7nt_mkv2_m2

k-mer sig=1.64; evalue=0.023

wvaCGSCGtywr

YWRACGSCGTBW

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wvaCGSCGtywr

7240_MYB52_ArabidopsisPBM_20140210_ 7240_MYB52_ArabidopsisPBM_20140210_ R 8 0.5714 0.733 0.419 NA NA

7218_DOF5.7_2_ArabidopsisPBM_20140210_ 7218_DOF5.7_2_ArabidopsisPBM_20140210_ D 8 0.5714 0.711 0.406 NA NA

Total matches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 7 (41.18%)
Max nb of predicted sites per peak: 8
(CYP73A5)
Mean nb of predicted sites per peak: 3.00

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 oligos_7nt_mkv2_m3

k-mer sig=1.06; evalue=0.087

vryGCatGCatGbr

YVCATGCATGCRYB

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vryGCatGCatGbr

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 8 (47.06%)
Max nb of predicted sites per peak: 13
(CYP82C4)
Mean nb of predicted sites per peak: 4.75

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 oligos_7nt_mkv2_m4

k-mer sig=0.34; evalue=0.46

syCtCTCTCtc

GAGAGAGAGRS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (58.82%)
Max nb of predicted sites per peak: 13
(AT5G20950)
Mean nb of predicted sites per peak: 4.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 oligos_7nt_mkv2_m5

k-mer sig=0.13; evalue=0.74

ybtCttCTTCwy

RWGAAGAAGAVR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ybtCttCTTCwy

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 11 (64.71%)
Max nb of predicted sites per peak: 5
(CYP98A3)
Mean nb of predicted sites per peak: 1.91

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_8nt_mkv2_m1

k-mer sig=7.36; evalue=4.4e-08

mytCaCCaaCCCCvc

GBGGGGTTGGTGARK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mytCaCCaaCCCCvc

7237_MYB111_2_ArabidopsisPBM_20140210_ 7237_MYB111_2_ArabidopsisPBM_20140210_ R 10 0.6667 0.811 0.541 NA NA

7242_MYB55_ArabidopsisPBM_20140210_ 7242_MYB55_ArabidopsisPBM_20140210_ D 10 0.6667 0.781 0.521 NA NA

7243_MYB55_2_ArabidopsisPBM_20140210_ 7243_MYB55_2_ArabidopsisPBM_20140210_ R 10 0.6667 0.745 0.497 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 11 (64.71%)
Max nb of predicted sites per peak: 5
(CYP73A5)
Mean nb of predicted sites per peak: 2.64

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 oligos_8nt_mkv2_m2

k-mer sig=2.64; evalue=0.0023

cwaaCGGCGtbk

MVACGCCGTTWG

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cwaaCGGCGtbk

7240_MYB52_ArabidopsisPBM_20140210_ 7240_MYB52_ArabidopsisPBM_20140210_ D 8 0.5714 0.806 0.461 NA NA

Total matches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 8
(CYP73A5)
Mean nb of predicted sites per peak: 2.22

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 oligos_8nt_mkv2_m3

k-mer sig=2.15; evalue=0.0071

kyGGtGGaGack

MGTCTCCACCRM

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kyGGtGGaGack

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 11 (64.71%)
Max nb of predicted sites per peak: 7
(CYP98A3)
Mean nb of predicted sites per peak: 2.27

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 oligos_8nt_mkv2_m4

k-mer sig=1.76; evalue=0.017

tsrtGCaTGCaysa

TSRTGCATGCAYSA

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tsrtGCaTGCaysa

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 6 (35.29%)
Max nb of predicted sites per peak: 13
(CYP82C4)
Mean nb of predicted sites per peak: 4.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 oligos_8nt_mkv2_m5

k-mer sig=1.70; evalue=0.02

gaGaGaGaGaGrG

CYCTCTCTCTCTC

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gaGaGaGaGaGrG

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 11 (64.71%)
Max nb of predicted sites per peak: 16
(AT5G20950)
Mean nb of predicted sites per peak: 5.36

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 dyads_m1

k-mer sig=6.37; evalue=4.3e-07

mttCaCCaaCCCCSmc

GKSGGGGTTGGTGAAK

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mttCaCCaaCCCCSmc

7237_MYB111_2_ArabidopsisPBM_20140210_ 7237_MYB111_2_ArabidopsisPBM_20140210_ R 10 0.6250 0.811 0.507 NA NA

7243_MYB55_2_ArabidopsisPBM_20140210_ 7243_MYB55_2_ArabidopsisPBM_20140210_ R 10 0.6250 0.780 0.487 NA NA

7242_MYB55_ArabidopsisPBM_20140210_ 7242_MYB55_ArabidopsisPBM_20140210_ D 10 0.6250 0.780 0.487 NA NA

Total matches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 12 (70.59%)
Max nb of predicted sites per peak: 8
(4CL1)
Mean nb of predicted sites per peak: 2.83

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 dyads_m2

k-mer sig=3.75; evalue=0.00018

amvAAAACAaa

TTTGTTTTBKT

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor amvAAAACAaa

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 2 (11.76%)
Max nb of predicted sites per peak: 2
(HST)
Mean nb of predicted sites per peak: 1.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 18 dyads_m3

k-mer sig=2.12; evalue=0.0076

ygCaTGCatr

YATGCATGCR

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 9 (52.94%)
Max nb of predicted sites per peak: 7
(CYP82C4)
Mean nb of predicted sites per peak: 3.22

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 19 dyads_m4

k-mer sig=1.33; evalue=0.047

dkCCCCwCtCtc

GAGAGWGGGGMH

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dkCCCCwCtCtc

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (58.82%)
Max nb of predicted sites per peak: 4
(CCoAOMT1)
Mean nb of predicted sites per peak: 2.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 20 dyads_m5

k-mer sig=1.18; evalue=0.066

syCtCTCTCtc

GAGAGAGAGRS

[ k-mers: statistics assemblies ]
[ matrix: tab_format transfac_format ]

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 10 (58.82%)
Max nb of predicted sites per peak: 13
(AT5G20950)
Mean nb of predicted sites per peak: 4.50

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ clustering: html ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus ArabidopsisPBM database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSAT - peak-motifs result

Analysis: list_up1 (26/02/2026 13:59)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mvAAAACAaa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mrAAGAAArr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vryGCatGCatGbr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ybtCttCTTCwy

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cwaaCGGCGtbk

7240_MYB52_ArabidopsisPBM_20140210_ 7240_MYB52_ArabidopsisPBM_20140210_ D 8 0.5714 0.806 0.461 NA NA

Total matches= 1

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kyGGtGGaGack

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tsrtGCaTGCaysa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gaGaGaGaGaGrG

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor amvAAAACAaa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dkCCCCwCtCtc

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSAT - peak-motifs result

Analysis: list_up1 (26/02/2026 13:59)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ygCaTGCatr Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor mvAAAACAaa Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor mrAAGAAArr Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor vryGCatGCatGbr Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor syCtCTCTCtc Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ybtCttCTTCwy Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor cwaaCGGCGtbk 7240_MYB52_ArabidopsisPBM_20140210_ 7240_MYB52_ArabidopsisPBM_20140210_ D 8 0.5714 0.806 0.461 NA NA Total matches= 1

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor kyGGtGGaGack Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor tsrtGCaTGCaysa Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor gaGaGaGaGaGrG Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor amvAAAACAaa Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ygCaTGCatr Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor dkCCCCwCtCtc Total matches= 0

ArabidopsisPBM name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor syCtCTCTCtc Total matches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mvAAAACAaa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mrAAGAAArr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor vryGCatGCatGbr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ybtCttCTTCwy

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor cwaaCGGCGtbk

7240_MYB52_ArabidopsisPBM_20140210_ 7240_MYB52_ArabidopsisPBM_20140210_ D 8 0.5714 0.806 0.461 NA NA

Total matches= 1

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kyGGtGGaGack

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor tsrtGCaTGCaysa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor gaGaGaGaGaGrG

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor amvAAAACAaa

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ygCaTGCatr

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dkCCCCwCtCtc

Total matches= 0

ArabidopsisPBM

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCtCTCTCtc

Total matches= 0