| Input files | |
|---|---|
| motif_db_JASPAR2024_CORE_vertebrates_non-redundant |
/var/www/html/rsat/public_html/motif_databases/JASPAR/Jaspar_2024/JASPAR2024_CORE_vertebrates_non-redundant_pfms_transfac.txt |
| test_seq |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/peak-motifspeak_seq |
| Directories | |
| output |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/ |
| Output files | |
| 1nt_test_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_freq-1str-ovlp_1nt.tab |
| 1nt_test_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_heatmap-1str-ovlp_1nt.png |
| 1nt_test_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_inclusive-1str-ovlp_1nt.txt |
| 1nt_test_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.tab |
| 1nt_test_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20.png |
| 1nt_test_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_1nt_ci20_graph_index.html |
| 1nt_test_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_transitions-1str-ovlp_1nt.tab |
| 2nt_test_freq |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_freq-1str-ovlp_2nt.tab |
| 2nt_test_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_heatmap-1str-ovlp_2nt.png |
| 2nt_test_inclusive |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_inclusive-1str-ovlp_2nt.txt |
| 2nt_test_profiles |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab |
| 2nt_test_profiles_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.png |
| 2nt_test_profiles_index |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20_graph_index.html |
| 2nt_test_transitions |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/composition/peak-motifs_test_transitions-1str-ovlp_2nt.tab |
| archive |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/peak-motifs_archive.zip |
| links |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_links.html |
| log |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_log.txt |
| merged_sites |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/sites/peak-motifs_all_motifs_seqcoord.tab |
| merged_sites_bed |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/sites/peak-motifs_all_motifs_seqcoord.bed |
| merged_words |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/merged_words/peak-motifs_merged_words.tab |
| merged_words_heatmap |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/merged_words/peak-motifs_merged_words_heatmap.png |
| merged_words_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/merged_words/peak-motifs_merged_words.html |
| motifs_disco_clusters |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_discovered_clusters |
| motifs_disco_clusters_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_discovered_clusters_SUMMARY.html |
| motifs_disco_compa |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab |
| motifs_disco_compa_alignments_1ton |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab |
| motifs_disco_compa_alignments_1ton_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html |
| motifs_disco_compa_gml |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_disco_compa.gml |
| motifs_disco_compa_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_disco_compa.html |
| motifs_discovered |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_discovered.tf |
| motifs_discovered_table |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_motifs/peak-motifs_motifs_discovered_table.tab |
| motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.tab |
| motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.tab |
| motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_alignments_1ton.html |
| motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_gml |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.gml |
| motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/discovered_vs_db/peak-motifs_motifs_vs_db_JASPAR2024_CORE_vertebrates_non-redundant.html |
| positions_6nt |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50.tab |
| positions_6nt_2pssm |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_log.txt |
| positions_6nt_asmb |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm.asmb |
| positions_6nt_pssm_counts |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.txt |
| positions_6nt_pssm_logo1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1.png |
| positions_6nt_pssm_logo2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m2.png |
| positions_6nt_pssm_logo3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m3.png |
| positions_6nt_pssm_logo4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m4.png |
| positions_6nt_pssm_logo5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m5.png |
| positions_6nt_pssm_logo_rc1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m1_rc.png |
| positions_6nt_pssm_logo_rc2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m2_rc.png |
| positions_6nt_pssm_logo_rc3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m3_rc.png |
| positions_6nt_pssm_logo_rc4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m4_rc.png |
| positions_6nt_pssm_logo_rc5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices_logo_m5_rc.png |
| positions_6nt_pssm_sig |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_sig_matrices.tf |
| positions_6nt_pssm_tf |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf |
| positions_7nt |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50.tab |
| positions_7nt_2pssm |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_log.txt |
| positions_7nt_asmb |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm.asmb |
| positions_7nt_pssm_counts |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.txt |
| positions_7nt_pssm_logo1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m1.png |
| positions_7nt_pssm_logo2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m2.png |
| positions_7nt_pssm_logo3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m3.png |
| positions_7nt_pssm_logo4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m4.png |
| positions_7nt_pssm_logo5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m5.png |
| positions_7nt_pssm_logo_rc1 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m1_rc.png |
| positions_7nt_pssm_logo_rc2 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m2_rc.png |
| positions_7nt_pssm_logo_rc3 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m3_rc.png |
| positions_7nt_pssm_logo_rc4 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m4_rc.png |
| positions_7nt_pssm_logo_rc5 |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices_logo_m5_rc.png |
| positions_7nt_pssm_sig |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_sig_matrices.tf |
| positions_7nt_pssm_tf |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.tf |
| small_summary |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/peak-motifs_small_summary.html |
| small_summary_txt |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_small_summary.txt |
| synthesis |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/peak-motifs_synthesis.html |
| test_converted |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/data/sequences/peak-motifs_test_maxlen1000.fasta |
| test_purged |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta |
| test_seqlen |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/data/sequences/peak-motifs_test_seqlen.tab |
| test_seqlen_distrib |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/data/sequences/peak-motifs_test_seqlen_distrib.tab |
| test_seqlen_distrib_graph |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/data/sequences/peak-motifs_test_seqlen_distrib.png |
| timelog |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_timelog.txt |
| timelog_html |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_timelog.html |
| timetable |
/var/www/html/rsat/public_html/tmp/www-data/2025/05/15/peak-motifs.2025-05-15.223835_2025-05-15.223835_QmzWfz/reports/peak-motifs_timetable.txt |
